MADS-box transcription factor, plant
Database | ID | Description |
---|---|---|
GO | GO:0003677 | DNA binding |
PANTHER | PTHR11945 | MADS BOX PROTEIN |
GO | GO:0006355 | regulation of transcription, DNA-dependent |
GO | GO:0046983 | protein dimerization activity |
PFAM | PF01486 | K-box region |
GO | GO:0003700 | sequence-specific DNA binding transcription factor activity |
KOG | KOG0014 | MADS box transcription factor |
KEGGORTH | K09264 | MADS-box transcription factor, plant |
GO | GO:0005634 | nucleus |
PANTHER | PTHR11945:SF143 | |
PFAM | PF00319 | SRF-type transcription factor (DNA-binding and dimerisation domain) |
Gene symbol | Product | Transcript ID | Status |
---|---|---|---|
MpMADS2 | transcription factor, MIKC-type MADS-box protein 2 | Published |
Sequences: |
Gene UTR + CDS + intron |
>Mapoly0011s0161.1 AGAGAGAGAG AGAGAGAGAG AGAGAGGGAG GGAGAAAGAG AGAACGGAGG GCGAGAGTCA GTAGATAGAG ATAGACGTAG TCAGCCGAGG CGAACTTGCT TAATTCGGCC GAGCAACCAG GCTCATGGTT TGCTATCTTT GTCGCTCCGC GGAGCGTCGA GATCGGTGAA CTTTTTTTTT GAATCATCAG TCGTCGTTCG TTCTTTACGG GAAGGTATGA TTCTCATATC TGACCACCTT TTCCGGAGCT TCGGCACTTG GTTTCCTCGA GGTGTCTCAT GTGTAGTCCG CCTTCGAGCA GGATGCAGTA TTTGTAGGAT CTTTGCGCGT TTCTCGAGAT ATGCTTCTAT TTTCGACTTT GGCAACTTTT GCAAGCTTGT GTGCTTGAAA TCTGCATTTG GTGCCTCACC TGCTATACGA ATTGCACTCT TATCGTCACA GACTCGCCGA AACTTGGCCC ATTGTGTATT TTCTGCACAC TGTTGAGCTG CAAATCAGGT CACCAAATTT CGTGCGCGTG TTTCACGAAC ATGTTCTACT GAAGCCGCGA CAGATCTAGA TTCGTGTATC ATACTGAAGG CTGCTGAGAA CCTTGGAAAT GAAGGTATAT GACATTCCGC GTCTTGTGTT GCCAGTGCGA GATTGAGTGT AATGCTCCTA CGCATCACGT GCGTTCAGTG CGTCGGTGCG TCGTTTGAGT CTTGGACGAG TGTGCCTCAC CCCTCATCAT TGTGGAGACC TAGAGTTTCA TCGCGTTATC AGAGAGGCAC GAGCTGAGTT GCGCACGATT GAGGACTTTC CAGCACTGAA GCAGAGGACG ATAAGCGCTT GCAAGAGCAG AGACAGCTGG GAGAAGTGCG GGGACGTAAG CGAGACAGGT TCTTTTGTAA GGGTTAAAAA CGACGCCACA GATTGGAAAG GATCCAATGG GGCGCGGAAA AATAGAAATT AAGAAAATAG AGAATCCTAC TAGCAGGCAG GTCACGTTTT CTAAGCGACG TGGGGGCCTG ATGAAGAAGG CCCATGAGCT TTCAGTGCTG TGCGATGCAG AAATAGCAGT TATAATCTTC TCCAGCACGG GAAAGCTCTT TGAATTCTCA AGCAATGGAG GGTATGTAAA TTTGCTTCCT TGATCTTGTC GATGAGCGCA GTGTTCTAGA GTTCTTATGA ATCTGTCATT TACCACTCTT CATTGTTTTT CCCTCGCCGT CTTATTCTGA TATCTGGGTC AGTCCACGAA CTGAGTCATT GGAGGTAGGT TCGTACATGG TACTCGAGTA GTTCTCGAGC TAACGAAAAT GCAGCCAGTA GGTGCGCAAT TAGCCCATGT GTTGGAGGGA TCTCTTGCCG CCGAAGGGTG GGGCCCTGAG ACTACTCAAT TTAGCTAGGA GCTCCGGACG AGCACTATGT CAAGATCTTT TGGGCAGTCT TATTAATTCA TAGGATCTGA AGCTCTCCAC GAGGCATGCC GGCAGGGTAT ACCTACCCAT CATTACGATT TCGCAAATCG ATGGCAGTTG GAAGATGTTG GTTACCTCCG GCGCTTTGGG TCTCTTTGAG GTCTAAACAT TACGTGCGAG TCTCGTCTTG AAGTGGCTGG GAAAAGACAC TGCACACCAG TCGGTCACTG CTTCGTTCAA TACAACACTC GAGCTTAAGT CAGGTTATTG GGAGTTGATT AGATCATCGC GCATGAGGTT CTATGACGCA GTGCACGGAG CACTGCAATG GTTGAAAATT GAATCCAAGT CAAAGGCTTA GCCGAACAGC GATCAGGATC GTCATCCACA ACCTGCATTC AGTTTTGGGG AGCAAGTGCA GTGTCGATTT TCCTGGTGTT ACTGTCACGA ACTTGCATCC TGCCGCCAAT TTTCAGTGGA GGGCAGAAGC ATTTGTGCAC TCGGGGCGAT GAGATTGTGA GAGTCGTGGA TTTGATCTGC CCGATCAAGT ATAAGTTAGT CGTGGCGGTC CCTCACGACC GTCTAGTACC TCTACACGTA TCTTAATCGA TCCGGTACTT TCAGTCAATG AAACCGCGCG GTACCAAGAG GATTTTTACG GCGTGTTGGA CTTGTGGAAT GTCCTTCCTC TAAAGGACTT CCCGCTATTG ACCAGTAACG TAATCCGTTA GTCGAGTTCT CGGCCTCTGG GCATGTGTTT GTACTCTCCA GTCTTGAATT TAGCAGTTAA CTGCGACTCT CATTGTAATA TCCAATATAT GCGGACTTTG CCCAGTACGA ATTCGTTCGG ATTTCGCGTG AGGAACGTGA GGATGACTCT TTCAGTACCC ACGAGCGTGG TAACTAGGGT TAATATAGCG AGGAAGTTGG TGAGCAAATT CGCCTTCAAG TACAGTCGAC GTTTTCTGCT GTACATCTAG ATACGGTCAA AACGTACCTT CTGGGAGGTT GGAGGTGCAA ATGCGTAGGT CACAGTTATG TCATTCTACG TCATATGGTA GTGAGAAGGG GCGCTCCAGA GGTTTAGAGA CGACGTTTTA GGTAAGGTTT TGCTCTTCAA GACACCATGG TAATCGTCAG GCGATTACCC GTATGTCATG AAGCGCCATT GTTATGGAGT AAAGCAGAAG GTTATAGAGA TCGTTAAAGC TCCTGCAGCC TCGTAGATAC ATTAATGAAG GGCTGAGTGA GTATCCCAGG TGGATGAATC CCATCACCCA TCGACCCTGA GTACCCTTCC CGTCGGACGC AGCTTTTGAT TTCCCGCCAC TGCATGTGCC GGATATGCTA GTGTTCGGCT GAGAGAACAA TGGAAACGTG ACAGGAACCG TCGAAGATGA TGTATTTGGT GTAAACAATG GTTTTGTAAC AGGAACTGTT GGGAAGGTAA CTTACAGGGG AAATTAAATA TCTGTAGATG CTGGTCACCA AACGAGAGGC TTCAAGAGGT TGAACTTACC GCCTGCCTCG AAATTGTTCA GCGAATAATT CTAGGCGAAG CGATCTTTCT GTGGGTCGTC TGACATGGTG GATTAACTCT CTCTGAATTG GTAGCAGATT ACGTCACCAT CTTTGACATA TTGCACGCGA GAAAAGGAGG TCGTTTGAGA AGAGTTGCCC AGAATAGCGT TCCCCTTGAC CTCGATCGCT GTCCTGGTCG CCCAACTCTT TTTTGGGATT GAGTGGGGAC TTTCGCCGAG CGTGTATTGA ATGTCTTCCA CTAAGATGGA AATTAAATTA CAAGCAGACT TGATATAATA GGTCTTTCCG TCTCGTGGAG CGACTCCGTC AAATTTCCGT CATTTGAACA GTCGATGACG GGAATCAATT AGGACAATTA TTGAAGAGGA CAGCATGCAG AACTTAAGAG ACTGAGTCGG CAATCTACAT CCCTGCTCTC CGAGTTCTCC CATCATCGCG CGAAGAAGAC TTGCTGCCGA CGATTATGAT GCGCTTTACT CATGATTAGT ATAACACGTA ATCATACAGA TCGCGAAAGG AGGTTCCTGA CGTGGGCAGT TTCACTTAGG TCATATAGTA TCTTACCATG GCTGTCTTAT GTGGCCAAGT CCTAGTACGT ATGCTTTTAC AATTCAGGCA TGGCCAAAAA ATTTCTGCTG CGCTGACATA TTCTCCTGAC GCGTTTGTTG TAACTTGACG GATTTTGTGA TAGCTAGAAT GAAGGAGATT CTTGAAAGAT ACAGCAAGAA TCCAGATGGG ATCCAGGCAG GGAGAATGGG AGACAACAAC GACGTATGTT TTCCAACTCT ATACGTCCGT TGCGCTCGTG ATGATGTATA GGAATATAGG CCATTCTCCC AATTAGTTTT AATAAATTGT CGAGTCCCAG AATAGTTTTT TCCACCTGTA GGCTAAGGGA GTAGTTTTTG CAAACACTGC TGGAAGCGAA TGTCACCGGG TTGTCGCATC TACGATAAGG ATTAGTTGGA CTTCGATTTT GATAGGAAAT GAGAATTCGT AGAACCTTAA TTCCGAACCT AAGTCTGATG TCTCACATCC ACACGTCATA TTCTTTCTTG GGATGCACAT GCTCTCAACA AGCGAAACAC GAATAGTTCG GTTCGGAAAC TTCTCAGTGG TTCTGTTGTG GAGCCATTTG AGTTTTTTTA TGCCATCATT TGCGTGTTAG ACGAGTTTAT AGGTATACAC TAAGTGCTGC TAGAAGCATA TATCTTTTAC CTGGTTCCAC ACTACCTTAA CGTGTAAAGA TTTTGAGGTT TGAGAAGGAA AAACTTACGC ACTGTTTTGT GTAGCAGTAC ATGAGTCGGG AAGTGATGAA GTTGCGACAG CAGTTGGAGC ACTCTCAGCA TACTCAGAGG TGCAAACATA CTTCGAGTTT TCTTTGCCTC ACGAAAGTAG AGTTTAAAGT TGTCTTCTGT TCTTGGACAA CTCATTCCTC AGTGTACGAT TCATGTTAGG GGGATATGTA AGCTGGCTCT AAAATAAGCA CCATGCCGAT ACATTCCTGT GAAAGGTAAG GACTAAAGAT CAAACAGTCA TGCACGTTCG CGACCCCTGC AGATTTTGAA GCAGATATAC GGATACTGAT TCAAGGAACA TTTACTACGT GCAGGCACAT GTTGGGTGAA GACCTAACAG TTTTGAGTGT ACCTGATTTG CTCCAGCTCG AGCAGCAACT TGATGTAGGT GTGAGTCGGG TTCGCCAAAG GAAGGTACAT TGCTTTGCTA TGAGCTTCAC GGTTACAGCC TTTTCTACTG ACTTCTTGTC ATGTCAACTG TGGAGCTGTT CAATCAATCT GAAGTGCTAG CACTAGTATT CTTCATATTT ACATTTCAAC ACTCGTTCTA CAATCAGTGA ATATTCTACA ATTGACACCA AATTAACATG AAATTTTGCA TGAACACAAC ATCGGTTTGA GTTAAGCAGT TGAGATTTTT GATTCTCCAC TGTTGCTGGC TTGAGCATGG TACCCTGTTC TTGCGAATGA ACAGACTTTT AATTCGAAGT GTTGAGACTG CCCCTAACTA TAAATAAACA TTTTTCAGAA CTTCTTTTGG GTAGTCTCCT CGACCACTTA CAAGTCATGA TCACATTTTA CTTACATACT CATCTTTTGT CTGCCTCAGA GCCAACTCTT GCTTGAGGAA ATAGAGGAAC TGCGGCGTAA GGTATTTGTA AGTTCGCAAT TGCCGTAAAT TGAGTAGCAT GTGCACATGT AATAACGTAG GAGCAAATAC AGTAAATTCT GTGCTGACTT GTACTCTTCC GAGCATTTTC TGGCATCTAT TTTTTTCTTA TTTACTTAAA GTTCATTTCC AGAAGAGTCA TATCTCTAGG AACTTTTGTG ACAACTTTAG GTTGATTCTT TTACTTCTGT GTTGCACATG TACTTAATTG TCTTGTAAAG ATTTTACCTG GGCTTTGGGG ACGGGGCAAC TAAATGGCAA TTCGTTTTTC CAGGAACATA AACTTCATGA AGAAAACGAG GAGCTCCGCA GAAAGGTAGA CATCTGGCCT CATCTGGTTA CTAACACTCA AAACTTTGCT TTATGTTCAG AACTTTGTGC AGCGTTGAAG ATCATAAAAA AGTGATCGTT TTTCTATGAT TTTTTGAAAA GCTCATATTC ATGATTCGTG GCGCGTCAAC TAAGCATCTT ATTTTTGCTC TATTAAGTTG CTCGTTTGTT TACTCAATAC ATTGAGTTCA CTTTGTCTGT AGCTTGTAGA CGCAAAGGGA ATAGCAGACG CAGCAGCAAG AGGCGTGCCA GGCCTAGGTT CCAACCTGCA AAGTCCCAAT GCCAGGTCCG AATCGGCTGC AACACAATCA GTGCCTCAAG TTTATCCACT CCAGCCTAAT CTACGAGATC CTCAGCCCAC ATCACAACCA TCTCTACAAC TAGGGTATCC TGTTTCCCAT CTACCTTCAA CTGGAGCTCC ACTGTATATG CTGAAGTGAT GTAATTGCAC TGATAGTTAG AGCTCAGGTA GATATCTAGT GATCGACTGT CGCATTTATA TTTTAGCTAG AGAAGAGATT TTTTTTACCT TTGTTTCGCC GGGCTTGAAA TAAAGACACA CGTTTTTCCG CAATTAATCA GAAAACTGAG AATTCATTGT CTGAGCTTTC ATGGATTCAG GTTGTTCGCT CAAAGTTCGA GCAGGTCGAG AGGGCCCGCT CATCAGAATT CAGGGCCTGA GAATGAAGCA ACCAGCCGCC CATCTGAGTG GATGTTGCAA CATTAGGTAT CAAACACGGC TCCAGGTTGA TATTCATTCT ATCTACTTTG TAAGTCCGTG ATTAAATGGA AGAGAATATT GTCATTGATT TCCGACGGCA TTCACTTCTA CCGTTTGATG GATTATAAAG CTCAAATTTT CAAGTCGATT ATACTGTTAG TTTTTCGTTC CAATCACATG TGTGGGCCGC CCCCCCACCC CCCTCCCCCT CTTCCAAGAC TCTGCATTGT GTTAAAATGG AAACGGGAGA TGTGAGTTTC CCTTTGGTTC TTAGTGTCGC GTCTGAGTGC TACCTTCCTT TCGTTATCAT GGCCCAAGCA GTTTTGCCTT GGTCAGTAAT GGCCGTTATC TTCAGCGTAG GTCTTCTCTC ATATAGCTTC CTGTTACCTT ACACTTGCTA TAGACAACTA AAGTGGTTTC TGATTATGCT TGTCATTGTT TATAGGCAAG GAGGTATAGC AAACAGAAGT GTTAAGGTCG GTGCAGCCAG TACGACGCAG AGAAATTTTC AAAATTGCAG ATTCTCATGC TGATGAATTT CAATATTCAG ACATATTCTA AGCTGCCAGT TTCAAAAGCC TGGATTGACA GAGCAAGAAC ATATACATGA GCCGATGTGA TTCGGTGTTT TTCCAATCAT CAGTAGAAAT AGGCGGAGTC TTAAGCATTT CTCCTCTACA CAGATATATG TAGGTCTGGT GAACTTGAGG CAGATTCATG TTTCTTTTCT ACCGGTTTCT GTAGAAAAGG AAATGTGTAA TGCCATGACC GAACCTTTCT AGTTGTCTTT TACCCAATCT TTATACG |
mRNA UTR + CDS |
>Mapoly0011s0161.1 AGAGAGAGAG AGAGAGAGAG AGAGAGGGAG GGAGAAAGAG AGAACGGAGG GCGAGAGTCA GTAGATAGAG ATAGACGTAG TCAGCCGAGG CGAACTTGCT TAATTCGGCC GAGCAACCAG GCTCATGGTT TGCTATCTTT GTCGCTCCGC GGAGCGTCGA GATCGGTGAA CTTTTTTTTT GAATCATCAG TCGTCGTTCG TTCTTTACGG GAAGTGCGAG ATTGAGTGTA ATGCTCCTAC GCATCACGTG CGTTCAGTGC GTCGGTGCGT CGTTTGAGTC TTGGACGAGT GTGCCTCACC CCTCATCATT GTGGAGACCT AGAGTTTCAT CGCGTTATCA GAGAGGCACG AGCTGAGTTG CGCACGATTG AGGACTTTCC AGCACTGAAG CAGAGGACGA TAAGCGCTTG CAAGAGCAGA GACAGCTGGG AGAAGTGCGG GGACGTAAGC GAGACAGGTT CTTTTGTAAG GGTTAAAAAC GACGCCACAG ATTGGAAAGG ATCCAATGGG GCGCGGAAAA ATAGAAATTA AGAAAATAGA GAATCCTACT AGCAGGCAGG TCACGTTTTC TAAGCGACGT GGGGGCCTGA TGAAGAAGGC CCATGAGCTT TCAGTGCTGT GCGATGCAGA AATAGCAGTT ATAATCTTCT CCAGCACGGG AAAGCTCTTT GAATTCTCAA GCAATGGAGG AATGAAGGAG ATTCTTGAAA GATACAGCAA GAATCCAGAT GGGATCCAGG CAGGGAGAAT GGGAGACAAC AACGACTACA TGAGTCGGGA AGTGATGAAG TTGCGACAGC AGTTGGAGCA CTCTCAGCAT ACTCAGAGGC ACATGTTGGG TGAAGACCTA ACAGTTTTGA GTGTACCTGA TTTGCTCCAG CTCGAGCAGC AACTTGATGT AGGTGTGAGT CGGGTTCGCC AAAGGAAGAG CCAACTCTTG CTTGAGGAAA TAGAGGAACT GCGGCGTAAG GAACATAAAC TTCATGAAGA AAACGAGGAG CTCCGCAGAA AGCTTGTAGA CGCAAAGGGA ATAGCAGACG CAGCAGCAAG AGGCGTGCCA GGCCTAGGTT CCAACCTGCA AAGTCCCAAT GCCAGGTCCG AATCGGCTGC AACACAATCA GTGCCTCAAG TTTATCCACT CCAGCCTAAT CTACGAGATC CTCAGCCCAC ATCACAACCA TCTCTACAAC TAGGGTTGTT CGCTCAAAGT TCGAGCAGGT CGAGAGGGCC CGCTCATCAG AATTCAGGGC CTGAGAATGA AGCAACCAGC CGCCCATCTG AGTGGATGTT GCAACATTAG GTATCAAACA CGGCTCCAGG CAAGGAGGTA TAGCAAACAG AAGTGTTAAG GTCGGTGCAG CCAGTACGAC GCAGAGAAAT TTTCAAAATT GCAGATTCTC ATGCTGATGA ATTTCAATAT TCAGACATAT TCTAAGCTGC CAGTTTCAAA AGCCTGGATT GACAGAGCAA GAACATATAC ATGAGCCGAT GTGATTCGGT GTTTTTCCAA TCATCAGTAG AAATAGGCGG AGTCTTAAGC ATTTCTCCTC TACACAGATA TATGTAGGTC TGGTGAACTT GAGGCAGATT CATGTTTCTT TTCTACCGGT TTCTGTAGAA AAGGAAATGT GTAATGCCAT GACCGAACCT TTCTAGTTGT CTTTTACCCA ATCTTTATAC G |
CDS |
>Mapoly0011s0161.1 ATGGGGCGCG GAAAAATAGA AATTAAGAAA ATAGAGAATC CTACTAGCAG GCAGGTCACG TTTTCTAAGC GACGTGGGGG CCTGATGAAG AAGGCCCATG AGCTTTCAGT GCTGTGCGAT GCAGAAATAG CAGTTATAAT CTTCTCCAGC ACGGGAAAGC TCTTTGAATT CTCAAGCAAT GGAGGAATGA AGGAGATTCT TGAAAGATAC AGCAAGAATC CAGATGGGAT CCAGGCAGGG AGAATGGGAG ACAACAACGA CTACATGAGT CGGGAAGTGA TGAAGTTGCG ACAGCAGTTG GAGCACTCTC AGCATACTCA GAGGCACATG TTGGGTGAAG ACCTAACAGT TTTGAGTGTA CCTGATTTGC TCCAGCTCGA GCAGCAACTT GATGTAGGTG TGAGTCGGGT TCGCCAAAGG AAGAGCCAAC TCTTGCTTGA GGAAATAGAG GAACTGCGGC GTAAGGAACA TAAACTTCAT GAAGAAAACG AGGAGCTCCG CAGAAAGCTT GTAGACGCAA AGGGAATAGC AGACGCAGCA GCAAGAGGCG TGCCAGGCCT AGGTTCCAAC CTGCAAAGTC CCAATGCCAG GTCCGAATCG GCTGCAACAC AATCAGTGCC TCAAGTTTAT CCACTCCAGC CTAATCTACG AGATCCTCAG CCCACATCAC AACCATCTCT ACAACTAGGG TTGTTCGCTC AAAGTTCGAG CAGGTCGAGA GGGCCCGCTC ATCAGAATTC AGGGCCTGAG AATGAAGCAA CCAGCCGCCC ATCTGAGTGG ATGTTGCAAC ATTAG |
Protein |
>Mapoly0011s0161.1 MGRGKIEIKK IENPTSRQVT FSKRRGGLMK KAHELSVLCD AEIAVIIFSS TGKLFEFSSN GGMKEILERY SKNPDGIQAG RMGDNNDYMS REVMKLRQQL EHSQHTQRHM LGEDLTVLSV PDLLQLEQQL DVGVSRVRQR KSQLLLEEIE ELRRKEHKLH EENEELRRKL VDAKGIADAA ARGVPGLGSN LQSPNARSES AATQSVPQVY PLQPNLRDPQ PTSQPSLQLG LFAQSSSRSR GPAHQNSGPE NEATSRPSEW MLQH |