Mapoly0028s0058



Description

GL3 (GLABRA 3), TRANSCRIPTION FACTOR

Reference DB

Database ID Description
GO GO:0046983 Protein dimerization activity
OrthoMCL OG5_165732
PFAM PF00010 Helix-loop-helix DNA-binding domain
PFAM PF14215 BHLH-MYC and R2R3-MYB transcription factors N-terminal
PANTHER PTHR11514 MYC
PANTHER PTHR11514:SF9 GL3 (GLABRA 3), TRANSCRIPTION FACTOR

Nomenclature

[Notice] The nomenclature site is currently operated as a Beta version for testing.

Gene symbol Product Transcript ID Status
MpBHLH4 transcription factor, bHLH Mapoly0028s0058.1 Public

Transcript models

Transcript ID Location Sequences Gene model
Mapoly0028s0058.1 scaffold_28:601047..603873  ( - strand ) Gene /  mRNA /  CDS /  Protein
GenBank format (with flanking bases)

Mapoly0028s0058.1  

Gene structure:

mRNA scaffold_28:601047..603873  ( - strand )
three_prime_UTR scaffold_28:601047..601545  ( - strand )
CDS scaffold_28:601546..601686  ( - strand )
CDS scaffold_28:601835..603188  ( - strand )
CDS scaffold_28:603492..603577  ( - strand )
five_prime_UTR scaffold_28:603578..603873  ( - strand )

Sequences:

Gene

>Mapoly0028s0058.1
GCTCTTCCTCTTTCTCTCTCTCTCACCCTCTCTCTGTCTCTAACTCTCTCTCTCGGTCTCCTCTCGTCTCCTCATCTTCTACTGTCTATCTCAACAACAACAAGAACACTTCATCCCAACAACAGATGTCTTATGATAAGTCCTATTCACAATTCAGTTGAATTTCCAGCCGCCGCCAAGAGATCACAGCAACTCGGCAGGCTCTCACATACATTCACTCTAATCAGTGTGAGTGGGTGAAGACCACTGCGGTCTAAAAAAAAAAGCAGAAGATCCAAAATATCAAGCTCTTTAAAATGGGTCAGGGAGAGCAGTTGCGAGAGCTCGTTCGCTCGATGGGCTGGTCGTATGCGGTCCTTTGGTCCATCCCGCCGCTCATGACGTGAGTGGTTCGATTCGGTTCAATTCTGCACTACTTGCTCCTAGTGTGCCCGTCCGTTTGAGATCTAATTGCTTTCTGAGTAGTGTGTCGTGCTTTCCTAGGAACGCAATCGTGATTCTGCTTCAATTTTGTTCCTCGAAATTTCAAATTCCGGCTGCCGATTTCTCGCTGGTCTGCCTGTCGGGTGCCGAAGAGGATCCGATTGCTGAGTCTGGAAGATTATGGGATTTTCGCTGTAACGGGCTAGAAGCAAGGAATTCCAATCGTCAATAAATACTGACACCTCTCTCTCTCTCTCTCCAGGGAGCTAGTATGGACTGATGGATGGTACGAAGCAAGCAATTTGAAGGTGAATGTCGAGCGACTGTTCAACTCTTCGTACAAAACATGTTCTTTTGCTCCAGGATATGGATACGTTGGCAAGGTATTCACTCAAGGCCAGCACATTTGGGTGACGGGGGATGCCGTTCACAGACAGAGCACTACGTCGGGTCAAGCCACCTTCTTCAGCTCAGCAGGCATTCAGACTTTGCTGTGCTTTCCATGGTTCAACGGAGTAGTGGAGCTGGGCGCAGAGGGCTTGGTGCCGCAGAACGATGATCTCTTGCAACAGATACGGAGGTTCTTGTCCAACACTCCGGCTTCCAAGCTGCAGCAGCAGCAGCAGCATCTGAGGGGCATTCCAGCCGGTGATGATAGTTGTCATAGCAGCAGGTTCAGTTCTCTGTCTCCGTCCCAAGGTCCTCTGACGTCTCAGGGGCTTTCATCAGATGATGCCGAGGGCGGGGGCCTCAGTGACACCACTCTCAACCAGCCGGTGGATTCTTGCCCATCTCTCTCAATGGAGGACAGAATTATGCGCCAGCATTTTCGTTTGACAGCAATGTCCGGGATCGATAGCAGCTGCTATTGGGCTCAAGGTCCTGCAGCGGTAGATGCAGAGATTTTGCTCCCTGCAAAATCCTCGTCCATGTCCCAAGTTACTGGCGCAGCGGCAGGAGGCCTCCACCATCAGGGGGCTCACAGCGGAATCACTGGAATGATTGGAGCAGACTGGAGACTGGATTTCGGCTCGGACATTCATCAATTGACGTCGTCGCCAACCAGCACTCTCCAGCAGGCAGTGTTCACTCCACTGCCCGGCACAGAGCATGAGGAGTTCGAATCGTCCTCGTTTCTCGTCGCTTCTTCGCAGCTGAACCAAACGGCCAAGTCCCTATACCAACAGCAGCAGCATTTGCAACAGATGGCCGCCAAGAGCCCGACCTCGTCGGGAGTGGAAATCAGCAGCAACCAACAACAACACCTGCGTGGATTCCTATCGACGAAGAAGACGGGCACTCCCGCTTTCAAGCCATGGAAAGGGCAGAAGCAAGTGATCGGAGTCAAGAGGCAAAAGAGCCAGTCGAACCAGGTGCTGTTGCAGCGATCGATTAAGATGGTTCATCAAATTTCTTTACTCAACCAGAAGAAGGATGAGAAGAAACGGACCGAGCAGATGGCTCTGGCCATGCGGCGTGCTCCCACCGAGGCCAGAGAATATCACTCTTGCCACGACGAAGCAGCCATCAACCACATGCTCGCGGAGAGGAAACGAAGGGAAAAGCAAAAGGAGAACTTCTCCGCTTTGCGAGCGTTGATTCCGTTCGTCAGCAAGGTTGGTTACAGTCACCCGCTCAACTCAATCTATCACGCACGAACCTTCCTCCGTATTTCAGCATCTAGAGCTCAGATCAATATTTCCTACGTCCGCCTCTCATTAGCTGCTGTAACTGACTCTTGGCTTTCCTTGCTTGCTTGAGCAGACGGACAGAGCATCGATACTGGGCGATGCGATTCAGTACGTAAAACAGCTGAGATCACGAGTTCAGGAGTTGGAGAGCATTAACCGTGAGCTGGAGGCGCAAATACCCAACAGTCAACGGAAGCCGAACTCTTCTGTATAATGGATCGATAAATTGATCGATTGATTGATTATGCGCAGTAGGAGTCACAAACCCCCCCGTCACATCCAATTGCCGCCAGTAGTTGACGTCCAATCACTATCGGCTCGTCCCTATGCCCCCATGTTAGTTACAATGTCACAAGCGAATTGTACATTACCATTTTTTGGCTCTTCCTGGCAGAATTTTGGAGTCTCCCGGGAAGTCCAGATCATACGTAGAGACTAAATGACCATCGACGATCATCCGCCTGCGCATCGCATCGCACTACTTTTTATAACTGAAGGTACTGTAGTTGCCGCCAGTGAGCCAGCTCCATTCGCAACTCCAACGTTGCCAACGGGGACTTTAGAACATCTCGAAGCTTAGAATCTGCTCAGCCATTTGTACAGATCCCCAACCCGAACCTCTCATTGCTGTAGTTTAGTCTGTTTGAGTAATCCGATTCCGGGGGTCTATCATGTACAGTCGAATTTTGAATATACAAGTAAAGAGATTCGGA

mRNA

>Mapoly0028s0058.1
GCTCTTCCTCTTTCTCTCTCTCTCACCCTCTCTCTGTCTCTAACTCTCTCTCTCGGTCTCCTCTCGTCTCCTCATCTTCTACTGTCTATCTCAACAACAACAAGAACACTTCATCCCAACAACAGATGTCTTATGATAAGTCCTATTCACAATTCAGTTGAATTTCCAGCCGCCGCCAAGAGATCACAGCAACTCGGCAGGCTCTCACATACATTCACTCTAATCAGTGTGAGTGGGTGAAGACCACTGCGGTCTAAAAAAAAAAGCAGAAGATCCAAAATATCAAGCTCTTTAAAATGGGTCAGGGAGAGCAGTTGCGAGAGCTCGTTCGCTCGATGGGCTGGTCGTATGCGGTCCTTTGGTCCATCCCGCCGCTCATGACGGAGCTAGTATGGACTGATGGATGGTACGAAGCAAGCAATTTGAAGGTGAATGTCGAGCGACTGTTCAACTCTTCGTACAAAACATGTTCTTTTGCTCCAGGATATGGATACGTTGGCAAGGTATTCACTCAAGGCCAGCACATTTGGGTGACGGGGGATGCCGTTCACAGACAGAGCACTACGTCGGGTCAAGCCACCTTCTTCAGCTCAGCAGGCATTCAGACTTTGCTGTGCTTTCCATGGTTCAACGGAGTAGTGGAGCTGGGCGCAGAGGGCTTGGTGCCGCAGAACGATGATCTCTTGCAACAGATACGGAGGTTCTTGTCCAACACTCCGGCTTCCAAGCTGCAGCAGCAGCAGCAGCATCTGAGGGGCATTCCAGCCGGTGATGATAGTTGTCATAGCAGCAGGTTCAGTTCTCTGTCTCCGTCCCAAGGTCCTCTGACGTCTCAGGGGCTTTCATCAGATGATGCCGAGGGCGGGGGCCTCAGTGACACCACTCTCAACCAGCCGGTGGATTCTTGCCCATCTCTCTCAATGGAGGACAGAATTATGCGCCAGCATTTTCGTTTGACAGCAATGTCCGGGATCGATAGCAGCTGCTATTGGGCTCAAGGTCCTGCAGCGGTAGATGCAGAGATTTTGCTCCCTGCAAAATCCTCGTCCATGTCCCAAGTTACTGGCGCAGCGGCAGGAGGCCTCCACCATCAGGGGGCTCACAGCGGAATCACTGGAATGATTGGAGCAGACTGGAGACTGGATTTCGGCTCGGACATTCATCAATTGACGTCGTCGCCAACCAGCACTCTCCAGCAGGCAGTGTTCACTCCACTGCCCGGCACAGAGCATGAGGAGTTCGAATCGTCCTCGTTTCTCGTCGCTTCTTCGCAGCTGAACCAAACGGCCAAGTCCCTATACCAACAGCAGCAGCATTTGCAACAGATGGCCGCCAAGAGCCCGACCTCGTCGGGAGTGGAAATCAGCAGCAACCAACAACAACACCTGCGTGGATTCCTATCGACGAAGAAGACGGGCACTCCCGCTTTCAAGCCATGGAAAGGGCAGAAGCAAGTGATCGGAGTCAAGAGGCAAAAGAGCCAGTCGAACCAGGTGCTGTTGCAGCGATCGATTAAGATGGTTCATCAAATTTCTTTACTCAACCAGAAGAAGGATGAGAAGAAACGGACCGAGCAGATGGCTCTGGCCATGCGGCGTGCTCCCACCGAGGCCAGAGAATATCACTCTTGCCACGACGAAGCAGCCATCAACCACATGCTCGCGGAGAGGAAACGAAGGGAAAAGCAAAAGGAGAACTTCTCCGCTTTGCGAGCGTTGATTCCGTTCGTCAGCAAGACGGACAGAGCATCGATACTGGGCGATGCGATTCAGTACGTAAAACAGCTGAGATCACGAGTTCAGGAGTTGGAGAGCATTAACCGTGAGCTGGAGGCGCAAATACCCAACAGTCAACGGAAGCCGAACTCTTCTGTATAATGGATCGATAAATTGATCGATTGATTGATTATGCGCAGTAGGAGTCACAAACCCCCCCGTCACATCCAATTGCCGCCAGTAGTTGACGTCCAATCACTATCGGCTCGTCCCTATGCCCCCATGTTAGTTACAATGTCACAAGCGAATTGTACATTACCATTTTTTGGCTCTTCCTGGCAGAATTTTGGAGTCTCCCGGGAAGTCCAGATCATACGTAGAGACTAAATGACCATCGACGATCATCCGCCTGCGCATCGCATCGCACTACTTTTTATAACTGAAGGTACTGTAGTTGCCGCCAGTGAGCCAGCTCCATTCGCAACTCCAACGTTGCCAACGGGGACTTTAGAACATCTCGAAGCTTAGAATCTGCTCAGCCATTTGTACAGATCCCCAACCCGAACCTCTCATTGCTGTAGTTTAGTCTGTTTGAGTAATCCGATTCCGGGGGTCTATCATGTACAGTCGAATTTTGAATATACAAGTAAAGAGATTCGGA

CDS

>Mapoly0028s0058.1
ATGGGTCAGGGAGAGCAGTTGCGAGAGCTCGTTCGCTCGATGGGCTGGTCGTATGCGGTCCTTTGGTCCATCCCGCCGCTCATGACGGAGCTAGTATGGACTGATGGATGGTACGAAGCAAGCAATTTGAAGGTGAATGTCGAGCGACTGTTCAACTCTTCGTACAAAACATGTTCTTTTGCTCCAGGATATGGATACGTTGGCAAGGTATTCACTCAAGGCCAGCACATTTGGGTGACGGGGGATGCCGTTCACAGACAGAGCACTACGTCGGGTCAAGCCACCTTCTTCAGCTCAGCAGGCATTCAGACTTTGCTGTGCTTTCCATGGTTCAACGGAGTAGTGGAGCTGGGCGCAGAGGGCTTGGTGCCGCAGAACGATGATCTCTTGCAACAGATACGGAGGTTCTTGTCCAACACTCCGGCTTCCAAGCTGCAGCAGCAGCAGCAGCATCTGAGGGGCATTCCAGCCGGTGATGATAGTTGTCATAGCAGCAGGTTCAGTTCTCTGTCTCCGTCCCAAGGTCCTCTGACGTCTCAGGGGCTTTCATCAGATGATGCCGAGGGCGGGGGCCTCAGTGACACCACTCTCAACCAGCCGGTGGATTCTTGCCCATCTCTCTCAATGGAGGACAGAATTATGCGCCAGCATTTTCGTTTGACAGCAATGTCCGGGATCGATAGCAGCTGCTATTGGGCTCAAGGTCCTGCAGCGGTAGATGCAGAGATTTTGCTCCCTGCAAAATCCTCGTCCATGTCCCAAGTTACTGGCGCAGCGGCAGGAGGCCTCCACCATCAGGGGGCTCACAGCGGAATCACTGGAATGATTGGAGCAGACTGGAGACTGGATTTCGGCTCGGACATTCATCAATTGACGTCGTCGCCAACCAGCACTCTCCAGCAGGCAGTGTTCACTCCACTGCCCGGCACAGAGCATGAGGAGTTCGAATCGTCCTCGTTTCTCGTCGCTTCTTCGCAGCTGAACCAAACGGCCAAGTCCCTATACCAACAGCAGCAGCATTTGCAACAGATGGCCGCCAAGAGCCCGACCTCGTCGGGAGTGGAAATCAGCAGCAACCAACAACAACACCTGCGTGGATTCCTATCGACGAAGAAGACGGGCACTCCCGCTTTCAAGCCATGGAAAGGGCAGAAGCAAGTGATCGGAGTCAAGAGGCAAAAGAGCCAGTCGAACCAGGTGCTGTTGCAGCGATCGATTAAGATGGTTCATCAAATTTCTTTACTCAACCAGAAGAAGGATGAGAAGAAACGGACCGAGCAGATGGCTCTGGCCATGCGGCGTGCTCCCACCGAGGCCAGAGAATATCACTCTTGCCACGACGAAGCAGCCATCAACCACATGCTCGCGGAGAGGAAACGAAGGGAAAAGCAAAAGGAGAACTTCTCCGCTTTGCGAGCGTTGATTCCGTTCGTCAGCAAGACGGACAGAGCATCGATACTGGGCGATGCGATTCAGTACGTAAAACAGCTGAGATCACGAGTTCAGGAGTTGGAGAGCATTAACCGTGAGCTGGAGGCGCAAATACCCAACAGTCAACGGAAGCCGAACTCTTCTGTATAA

Protein

>Mapoly0028s0058.1
MGQGEQLRELVRSMGWSYAVLWSIPPLMTELVWTDGWYEASNLKVNVERLFNSSYKTCSFAPGYGYVGKVFTQGQHIWVTGDAVHRQSTTSGQATFFSSAGIQTLLCFPWFNGVVELGAEGLVPQNDDLLQQIRRFLSNTPASKLQQQQQHLRGIPAGDDSCHSSRFSSLSPSQGPLTSQGLSSDDAEGGGLSDTTLNQPVDSCPSLSMEDRIMRQHFRLTAMSGIDSSCYWAQGPAAVDAEILLPAKSSSMSQVTGAAAGGLHHQGAHSGITGMIGADWRLDFGSDIHQLTSSPTSTLQQAVFTPLPGTEHEEFESSSFLVASSQLNQTAKSLYQQQQHLQQMAAKSPTSSGVEISSNQQQHLRGFLSTKKTGTPAFKPWKGQKQVIGVKRQKSQSNQVLLQRSIKMVHQISLLNQKKDEKKRTEQMALAMRRAPTEAREYHSCHDEAAINHMLAERKRREKQKENFSALRALIPFVSKTDRASILGDAIQYVKQLRSRVQELESINRELEAQIPNSQRKPNSSV

MarpolBase: Marchantia Genome Database / Genome Informatics Laboratory, NIG. <mpgdb'@'ynlab.info>