Mapoly0171s0025



Description

SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED

Annotation

Database ID Description
GO GO:0042393 histone binding
GO GO:0003677 DNA binding
GO GO:0005524 ATP binding
KOG KOG0386 Chromatin remodeling complex SWI/SNF, component SWI2 and related ATPases (DNA/RNA helicase superfamily)
PANTHER PTHR10799 SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED
PANTHER PTHR10799:SF550
PFAM PF00176 SNF2 family N-terminal domain
PFAM PF00271 Helicase conserved C-terminal domain
PFAM PF14619 Snf2-ATP coupling, chromatin remodelling complex

Nomenclature

No gene symbols are registered for this gene.

Transcript models

Transcript ID Location Sequences Extract region
Mapoly0171s0025.1 scaffold_171:205564..241288 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mapoly0171s0025.2 scaffold_171:205431..241288 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mapoly0171s0025.3 scaffold_171:205431..241288 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mapoly0171s0025.4 scaffold_171:205564..241288 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.