| Database | ID | Description |
|---|---|---|
| SMART | SM00360 | rrm1_1 |
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| CDD | cd12224 | RRM_RBM22 |
| Gene3D | G3DSA:4.10.1000.10 | - |
| ProSiteProfiles | PS50102 | Eukaryotic RNA Recognition Motif (RRM) profile. |
| SUPERFAMILY | SSF54928 | RNA-binding domain, RBD |
| FunFam | G3DSA:3.30.70.330:FF:000476 | Zinc finger CCCH domain-containing protein 4 |
| Pfam | PF16131 | Torus domain |
| PANTHER | PTHR14089 | PRE-MRNA-SPLICING FACTOR RBM22 |
| Pfam | PF00076 | RNA recognition motif |
| SUPERFAMILY | SSF90229 | CCCH zinc finger |
| Pfam | PF21369 | STL11, N-terminal |
| SMART | SM00356 | c3hfinal6 |
| ProSiteProfiles | PS50103 | Zinc finger C3H1-type profile. |
| Gene3D | G3DSA:3.30.70.330 | - |
| FunFam | G3DSA:4.10.1000.10:FF:000036 | Zinc finger CCCH domain-containing protein 4 |
| KEGG | K12872 | pre-mRNA-splicing factor RBM22/SLT11 |
| KOG | KOG0153 | Predicted RNA-binding protein (RRM superfamily); [R] |
| MapolyID | Mapoly0103s0034 | - |
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpC3H1 | transcription factor, C3H | Provisional |
Caution: MBEX data are analyzed based on the v6.1 genome.
Link to the original image in MBEX
Sequences: |
Gene UTR + CDS + intron |
| >Mp1g00530.1 CTGTGGGGAG CGAGAGCAGT GGAGCCCACA GGTCTCGCTT TCAGCCTCGT CGTCTGTGGG GAGTAGTACA GCACAGGACT ACCCGCGCAT TGCATCCGCA GTGCACAGCA TCCGGAGCGC ATTGCCATGT TCACAGACCG ACCGACACAG GGAGACGTTT TCACGGGCAA ACGCGAGAGA GAGAGAAAGA GAGAGCGATA GTGCAAAATT TGGGCTCGTG CGTAGGGTTC AGAGGAGTGT ACAGAGAAGA ATATAGGTAG AGGCTCTGTA CTAGAGTCTG GAAGTGCATC GAGGGTTCGG CGGACTTGCG ACCTGAACGC CGTGCGGTAC TCGGAATGGC GCATCGGCTC CTCAGGGATG TTGAGGCCGA TGGATGGGAA CGCTCAGACT TTCCCATCAT CTGCGAATCT TGTCTTGGGG ATAATCCATA CGTTCGAATG GTACTGATTT CTGCCTTGAC TTGCAATGTT TCAGTGATTA AGAATGTTCG TTAGATGGTT GGAGTGAGAG AGGAATGTTG GATGGGAAGA ATTGGTTCAA CGTGCAGCTG ACTTTAGTTT ATCTGCCAGA GCTGGGGAGC GTCCATTTTT GCATGTCGTA ATGAAGAGGT TACGCATTTG TAGCTTGTGG GTTTGAAGCC GCTGAAATAA TTTCTGATTG CAGACTAAAG CCAATTTCGA TAAAGAGTGC AAAATCTGCA CCAGACCATT TACGGTCTTT CGGTGGAGAC CTGGACGTGA TGCTCGTTAC AAGAAGTCAG AGGTTTGCCA GACATGTAGC AAACTTAAGA ACGTTTGTCA AGTTTGCTTG CTCGACCTGG AGTATGGATT GCCCGTTCAA GTTCGAGATA CTGCTCTCGG TATAAGCACG AGTGACGCCA TCCCGAAGAG CGACGTCAAT CGGGAGTATT TTGCAGAAGA GCAAGATCGT AAGGTACAAT CAATATAAAG AGATTTTATT TTGTTGTCTT ATCCCGTGGG AACCCTAATA TTTCTGCTGT TGGTGAGGTC GAATGTTGTG ATGAGCCTAA AGTGGGTGTT TTGCAAACTC CAGGCGAGAG CAGGGTTGGA CTACGAGTCA TCTTACGGAA AGGCACGTCC GAATGACACA ATTTTGAAAC TCCAAAGAAC GACACCTTAT TACAAACGAA ATCGAGCTCA CATTTGTAGT TTCTATGTTC GAGGAGAATG TACTCGGGGA GCTGAGTGTC CTTACAGACA CGAAATGCCA GTTACTGGAG AACTCTCTCA GCAAAACATA AAGGATCGTT ATTACGGGTG TGTATTTTCC CCCCATTTTA CGTATCATTG AATCTCGATC GACTTTTACG TCTGTGTTCG TCCCATTTTC GTGCTTCCTT AGAGGAACTT CTCGAGAATG GAAGTACTTA GCTCTGGGCT AAAAGTCATC CATGTAGATA GATATTGATA GAGTAGGGTT TGTGTGAATA TTTGCGCACT TATTTGACCA ACATTTACAC GGTGTATGAT ATCGTTGTAA GAGGGGCTGT TGGTGGCATT GTAAAAGTTT CAAGCTCCTC ATAACGCTGT AATTCACTAG GCTTTGGTGT AAACTCTGGT ATTAATTATT AGTAGCCAAT TATGCCAGAA ACTTCACCGA AGTTTCTCGC ATGTTCGGGT GTTGGTATGC TGACACATTT CCGTCTTATT GTTTGTCTCA GTGTGAATGA TCCTGTTGCT GCAAAACTGT TAAGGAAAGC AGGGGAAATG CCATCCCTTG TTCCACCTGA GGACGAGAGC ATCAAGACCT TATACGTTGG GGGATTGGAC CAGCGGATTG GTGAGGAAGA CCTCAAGGAT CAGTTTTATG CTTATGGTGA GATCGAAAGT ATCAGATTGG TCTCACAAAG AGCTTGTGCT TTCATCACTT ACACCAACCG TGAGGGTGCG GAGAAGGCTG CTGATCACCT TGCGAATAAG TTGGTGATCA AGGGGCTGAG GTTGAAGCTA ATGTGGGGTA AACCTCAGTT ACCCAAGCCT GAAACAGAGG GCGGGGATGA CGAATCAGGC AAGCACAACG TTGGAGGAAT ACTTTCACAT GGAGGAATGC TCCCACGAGC GGTCATATCC CAGCAACAAC AACACAGTCA ACAAATGCAG GAAGAGCCTC CACTGAATTA CTTCAACATA CCTCCCCCTC CACCACCTTC TGAGAGACCT TTCTATCCGT CCATGGATCC TCAGAGGATG GGTGCCGTGG CACCAGGTCA GGAGGCGACG TCTTCTGGTC AGACAGAAAA CTCAAATCTA AGTGGTCCTC CTGGCACAAA CTCGGCTCAG CAAAATTCAC AGTATGGCGC TCCGCATGCT CCTCCACCTT ACGGGTATGC TCCAGGACCT CACTCTCAGT TTCAACAACC TCCGTTTCGC CCTCCCTATC CTCAAGCTGG TGCTGGTCCC CGGACCTACC CATACCTTCC TCCTTATCAT TCAGGACCCC CACCTCCCCC GCCACAACAG TATTATAGGC CTCAATTTTA GTGGAACCAC ATGGAATACT GTGGAGATTT TGGTGATCCT CATAGTACTT GTAGCATACA TGGTGACTGA AAACTCGTAG CCAAATAGAG GGTTTACAGG AAGGATGACT TAGAAGACCG TGTATACAAG GGCTGGATGA ATTGTACACA AACTGCGGTA GAGTCACATT ACAACCAGAG AGTAGGTGGC TGCATTGCCA CAGAGTTGGG AAGTGGGTGT TTTCCACTTC ATCTCGAGGA TACAGTTGTA TCTGGGTCAT ATGAAAATTT CACTTGAGCA AGCCTTTCTT CGTCGAAGAA TTTTATCCTG ATTGTGTCGA ATACTGCTTT TCGTGAACCT GGTCATCTAA GCTCATAACC GAGTCGCTTT TGTTCTTGTC GAATATTGTT CGTTCTTCTG TAATATATGC TCAAGACGTA CGAGTTACAT CGCCTTCACG GATCTAACCA GTGGAAGGAG ATGCTGTACA TTTTGTGAGA TGCCTAGACG AGCAAAGGAT ATTGTAACTG TCGGGGAAAT TTGGGCTTCC TTGTTGTTAA GATCCTAAAG GCTGCTCGAG TTTTCTGTCT AAAATGCCTA TACATGATAA GAGTTTCGGA AATCTCGACT TATCAC |
mRNA UTR + CDS |
| >Mp1g00530.1 CTGTGGGGAG CGAGAGCAGT GGAGCCCACA GGTCTCGCTT TCAGCCTCGT CGTCTGTGGG GAGTAGTACA GCACAGGACT ACCCGCGCAT TGCATCCGCA GTGCACAGCA TCCGGAGCGC ATTGCCATGT TCACAGACCG ACCGACACAG GGAGACGTTT TCACGGGCAA ACGCGAGAGA GAGAGAAAGA GAGAGCGATA GTGCAAAATT TGGGCTCGTG CGTAGGGTTC AGAGGAGTGT ACAGAGAAGA ATATAGGTAG AGGCTCTGTA CTAGAGTCTG GAAGTGCATC GAGGGTTCGG CGGACTTGCG ACCTGAACGC CGTGCGGTAC TCGGAATGGC GCATCGGCTC CTCAGGGATG TTGAGGCCGA TGGATGGGAA CGCTCAGACT TTCCCATCAT CTGCGAATCT TGTCTTGGGG ATAATCCATA CGTTCGAATG ACTAAAGCCA ATTTCGATAA AGAGTGCAAA ATCTGCACCA GACCATTTAC GGTCTTTCGG TGGAGACCTG GACGTGATGC TCGTTACAAG AAGTCAGAGG TTTGCCAGAC ATGTAGCAAA CTTAAGAACG TTTGTCAAGT TTGCTTGCTC GACCTGGAGT ATGGATTGCC CGTTCAAGTT CGAGATACTG CTCTCGGTAT AAGCACGAGT GACGCCATCC CGAAGAGCGA CGTCAATCGG GAGTATTTTG CAGAAGAGCA AGATCGTAAG GCGAGAGCAG GGTTGGACTA CGAGTCATCT TACGGAAAGG CACGTCCGAA TGACACAATT TTGAAACTCC AAAGAACGAC ACCTTATTAC AAACGAAATC GAGCTCACAT TTGTAGTTTC TATGTTCGAG GAGAATGTAC TCGGGGAGCT GAGTGTCCTT ACAGACACGA AATGCCAGTT ACTGGAGAAC TCTCTCAGCA AAACATAAAG GATCGTTATT ACGGTGTGAA TGATCCTGTT GCTGCAAAAC TGTTAAGGAA AGCAGGGGAA ATGCCATCCC TTGTTCCACC TGAGGACGAG AGCATCAAGA CCTTATACGT TGGGGGATTG GACCAGCGGA TTGGTGAGGA AGACCTCAAG GATCAGTTTT ATGCTTATGG TGAGATCGAA AGTATCAGAT TGGTCTCACA AAGAGCTTGT GCTTTCATCA CTTACACCAA CCGTGAGGGT GCGGAGAAGG CTGCTGATCA CCTTGCGAAT AAGTTGGTGA TCAAGGGGCT GAGGTTGAAG CTAATGTGGG GTAAACCTCA GTTACCCAAG CCTGAAACAG AGGGCGGGGA TGACGAATCA GGCAAGCACA ACGTTGGAGG AATACTTTCA CATGGAGGAA TGCTCCCACG AGCGGTCATA TCCCAGCAAC AACAACACAG TCAACAAATG CAGGAAGAGC CTCCACTGAA TTACTTCAAC ATACCTCCCC CTCCACCACC TTCTGAGAGA CCTTTCTATC CGTCCATGGA TCCTCAGAGG ATGGGTGCCG TGGCACCAGG TCAGGAGGCG ACGTCTTCTG GTCAGACAGA AAACTCAAAT CTAAGTGGTC CTCCTGGCAC AAACTCGGCT CAGCAAAATT CACAGTATGG CGCTCCGCAT GCTCCTCCAC CTTACGGGTA TGCTCCAGGA CCTCACTCTC AGTTTCAACA ACCTCCGTTT CGCCCTCCCT ATCCTCAAGC TGGTGCTGGT CCCCGGACCT ACCCATACCT TCCTCCTTAT CATTCAGGAC CCCCACCTCC CCCGCCACAA CAGTATTATA GGCCTCAATT TTAGTGGAAC CACATGGAAT ACTGTGGAGA TTTTGGTGAT CCTCATAGTA CTTGTAGCAT ACATGGTGAC TGAAAACTCG TAGCCAAATA GAGGGTTTAC AGGAAGGATG ACTTAGAAGA CCGTGTATAC AAGGGCTGGA TGAATTGTAC ACAAACTGCG GTAGAGTCAC ATTACAACCA GAGAGTAGGT GGCTGCATTG CCACAGAGTT GGGAAGTGGG TGTTTTCCAC TTCATCTCGA GGATACAGTT GTATCTGGGT CATATGAAAA TTTCACTTGA GCAAGCCTTT CTTCGTCGAA GAATTTTATC CTGATTGTGT CGAATACTGC TTTTCGTGAA CCTGGTCATC TAAGCTCATA ACCGAGTCGC TTTTGTTCTT GTCGAATATT GTTCGTTCTT CTGTAATATA TGCTCAAGAC GTACGAGTTA CATCGCCTTC ACGGATCTAA CCAGTGGAAG GAGATGCTGT ACATTTTGTG AGATGCCTAG ACGAGCAAAG GATATTGTAA CTGTCGGGGA AATTTGGGCT TCCTTGTTGT TAAGATCCTA AAGGCTGCTC GAGTTTTCTG TCTAAAATGC CTATACATGA TAAGAGTTTC GGAAATCTCG ACTTATCAC |
CDS |
| >Mp1g00530.1 ATGGCGCATC GGCTCCTCAG GGATGTTGAG GCCGATGGAT GGGAACGCTC AGACTTTCCC ATCATCTGCG AATCTTGTCT TGGGGATAAT CCATACGTTC GAATGACTAA AGCCAATTTC GATAAAGAGT GCAAAATCTG CACCAGACCA TTTACGGTCT TTCGGTGGAG ACCTGGACGT GATGCTCGTT ACAAGAAGTC AGAGGTTTGC CAGACATGTA GCAAACTTAA GAACGTTTGT CAAGTTTGCT TGCTCGACCT GGAGTATGGA TTGCCCGTTC AAGTTCGAGA TACTGCTCTC GGTATAAGCA CGAGTGACGC CATCCCGAAG AGCGACGTCA ATCGGGAGTA TTTTGCAGAA GAGCAAGATC GTAAGGCGAG AGCAGGGTTG GACTACGAGT CATCTTACGG AAAGGCACGT CCGAATGACA CAATTTTGAA ACTCCAAAGA ACGACACCTT ATTACAAACG AAATCGAGCT CACATTTGTA GTTTCTATGT TCGAGGAGAA TGTACTCGGG GAGCTGAGTG TCCTTACAGA CACGAAATGC CAGTTACTGG AGAACTCTCT CAGCAAAACA TAAAGGATCG TTATTACGGT GTGAATGATC CTGTTGCTGC AAAACTGTTA AGGAAAGCAG GGGAAATGCC ATCCCTTGTT CCACCTGAGG ACGAGAGCAT CAAGACCTTA TACGTTGGGG GATTGGACCA GCGGATTGGT GAGGAAGACC TCAAGGATCA GTTTTATGCT TATGGTGAGA TCGAAAGTAT CAGATTGGTC TCACAAAGAG CTTGTGCTTT CATCACTTAC ACCAACCGTG AGGGTGCGGA GAAGGCTGCT GATCACCTTG CGAATAAGTT GGTGATCAAG GGGCTGAGGT TGAAGCTAAT GTGGGGTAAA CCTCAGTTAC CCAAGCCTGA AACAGAGGGC GGGGATGACG AATCAGGCAA GCACAACGTT GGAGGAATAC TTTCACATGG AGGAATGCTC CCACGAGCGG TCATATCCCA GCAACAACAA CACAGTCAAC AAATGCAGGA AGAGCCTCCA CTGAATTACT TCAACATACC TCCCCCTCCA CCACCTTCTG AGAGACCTTT CTATCCGTCC ATGGATCCTC AGAGGATGGG TGCCGTGGCA CCAGGTCAGG AGGCGACGTC TTCTGGTCAG ACAGAAAACT CAAATCTAAG TGGTCCTCCT GGCACAAACT CGGCTCAGCA AAATTCACAG TATGGCGCTC CGCATGCTCC TCCACCTTAC GGGTATGCTC CAGGACCTCA CTCTCAGTTT CAACAACCTC CGTTTCGCCC TCCCTATCCT CAAGCTGGTG CTGGTCCCCG GACCTACCCA TACCTTCCTC CTTATCATTC AGGACCCCCA CCTCCCCCGC CACAACAGTA TTATAGGCCT CAATTTTAG |
Protein |
| >Mp1g00530.1 MAHRLLRDVE ADGWERSDFP IICESCLGDN PYVRMTKANF DKECKICTRP FTVFRWRPGR DARYKKSEVC QTCSKLKNVC QVCLLDLEYG LPVQVRDTAL GISTSDAIPK SDVNREYFAE EQDRKARAGL DYESSYGKAR PNDTILKLQR TTPYYKRNRA HICSFYVRGE CTRGAECPYR HEMPVTGELS QQNIKDRYYG VNDPVAAKLL RKAGEMPSLV PPEDESIKTL YVGGLDQRIG EEDLKDQFYA YGEIESIRLV SQRACAFITY TNREGAEKAA DHLANKLVIK GLRLKLMWGK PQLPKPETEG GDDESGKHNV GGILSHGGML PRAVISQQQQ HSQQMQEEPP LNYFNIPPPP PPSERPFYPS MDPQRMGAVA PGQEATSSGQ TENSNLSGPP GTNSAQQNSQ YGAPHAPPPY GYAPGPHSQF QQPPFRPPYP QAGAGPRTYP YLPPYHSGPP PPPPQQYYRP QF |