Mp1g02820



Description

Annotation

Database ID Description
ProSiteProfiles PS51467 HARP domain profile.
ProSiteProfiles PS51194 Superfamilies 1 and 2 helicase C-terminal domain profile.
ProSiteProfiles PS51192 Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile.
MobiDBLite mobidb-lite consensus disorder prediction
FunFam G3DSA:3.40.50.10810:FF:000044 Chromatin remodeling factor18
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases
CDD cd18010 DEXHc_HARP_SMARCAL1
Gene3D G3DSA:3.40.50.300 -
SMART SM00487 ultradead3
FunFam G3DSA:3.40.50.300:FF:001501 Chromatin remodeling factor18
Pfam PF00271 Helicase conserved C-terminal domain
Pfam PF00176 SNF2-related domain
PANTHER PTHR45766 DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 FAMILY MEMBER
Gene3D G3DSA:3.40.50.10810 -
CDD cd18793 SF2_C_SNF
Coils Coil Coil
SMART SM00490 helicmild6
KEGG K14440 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]
KOG KOG1000 Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily; [B]
MapolyID Mapoly0113s0030 -

Nomenclature

Gene symbol Product Transcript ID Status
Mpsnf1.1 Chromatin related protein Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g02820.1 chr1:3124463..3134466 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.