Mp1g05420



Description

Annotation

Database ID Description
SUPERFAMILY SSF50978 WD40 repeat-like
SMART SM00320 WD40_4
Gene3D G3DSA:2.130.10.10 -
PANTHER PTHR11227 WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED
Pfam PF21032 PROPPIN
MobiDBLite mobidb-lite consensus disorder prediction
KEGG K22991 WD repeat-containing protein 45
KOG KOG2111 Uncharacterized conserved protein, contains WD40 repeats; [S]
MapolyID Mapoly0005s0065 -

Nomenclature

Gene symbol Product Transcript ID Status
MpATG18b Autophagy protein Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g05420.1 chr1:5861192..5865859 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g05420.2 chr1:5861192..5865859 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g05420.3 chr1:5861192..5865859 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g05420.4 chr1:5861192..5865859 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g05420.5 chr1:5862003..5865859 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.