Mp1g06040



Description

Annotation

Database ID Description
SUPERFAMILY SSF57903 FYVE/PHD zinc finger
SUPERFAMILY SSF82199 SET domain
ProSiteProfiles PS51215 AWS domain profile.
Pfam PF00856 SET domain
CDD cd15565 PHD2_NSD
SMART SM00249 PHD_3
CDD cd15566 PHD3_NSD
Gene3D G3DSA:3.30.40.10 Zinc/RING finger domain, C3HC4 (zinc finger)
PANTHER PTHR22884 SET DOMAIN PROTEINS
CDD cd19175 SET_ASHR3-like
SMART SM00570 shorttest3
Gene3D G3DSA:2.30.30.140 -
ProSiteProfiles PS50016 Zinc finger PHD-type profile.
Pfam PF17907 AWS domain
ProSitePatterns PS01359 Zinc finger PHD-type signature.
SMART SM00317 set_7
SMART SM00508 PostSET_3
SMART SM00333 TUDOR_7
ProSiteProfiles PS50868 Post-SET domain profile.
ProSiteProfiles PS51578 Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile.
CDD cd20404 Tudor_Agenet_AtEML-like
Gene3D G3DSA:2.170.270.10 SET domain
SUPERFAMILY SSF63748 Tudor/PWWP/MBT
ProSiteProfiles PS50280 SET domain profile.
KOG KOG4442 Clathrin coat binding protein/Huntingtin interacting protein HIP1, involved in regulation of endocytosis; C-term missing; [U]
KOG KOG4299 PHD Zn-finger protein; C-term missing; [R]
KOG KOG4443 Putative transcription factor HALR/MLL3, involved in embryonic development; C-term missing; [R]
MapolyID Mapoly0005s0005 -

Nomenclature

Gene symbol Product Transcript ID Status
MpASHR1 Chromatin related protein Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g06040.1 chr1:6380117..6391768 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.