Mp1g06410



Description

Annotation

Database ID Description
ProSiteProfiles PS51192 Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile.
ProSiteProfiles PS51194 Superfamilies 1 and 2 helicase C-terminal domain profile.
CDD cd18793 SF2_C_SNF
Gene3D G3DSA:3.40.50.10810 -
SMART SM00487 ultradead3
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases
Pfam PF00176 SNF2-related domain
SMART SM00490 helicmild6
Pfam PF00271 Helicase conserved C-terminal domain
Gene3D G3DSA:3.40.50.300 -
PANTHER PTHR45821 SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED
KEGG K10875 DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
KOG KOG0390 DNA repair protein, SNF2 family; [L]
MapolyID Mapoly0043s0033 -

Nomenclature

Gene symbol Product Transcript ID Status
Mpsnf1.3 Chromatin related protein Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g06410.1 chr1:6910827..6916173 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g06410.2 chr1:6910827..6916173 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.