Mp1g07390



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
SUPERFAMILY SSF57903 FYVE/PHD zinc finger
ProSiteProfiles PS50013 Chromo and chromo shadow domain profile.
Gene3D G3DSA:3.40.50.300 -
SUPERFAMILY SSF54160 Chromo domain-like
ProSiteProfiles PS50016 Zinc finger PHD-type profile.
SMART SM00298 chromo_7
Gene3D G3DSA:2.40.50.40 -
Gene3D G3DSA:3.30.40.10 Zinc/RING finger domain, C3HC4 (zinc finger)
CDD cd15532 PHD2_CHD_II
PANTHER PTHR45623 CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED
Pfam PF00271 Helicase conserved C-terminal domain
ProSitePatterns PS01359 Zinc finger PHD-type signature.
Gene3D G3DSA:3.40.50.10810 -
ProSiteProfiles PS51192 Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile.
Coils Coil Coil
Pfam PF00176 SNF2-related domain
SMART SM00249 PHD_3
Pfam PF00628 PHD-finger
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases
ProSiteProfiles PS51194 Superfamilies 1 and 2 helicase C-terminal domain profile.
Gene3D G3DSA:6.10.250.1310 -
KOG KOG0384 Chromodomain-helicase DNA-binding protein; C-term missing; [K]
KOG KOG3910 Helix loop helix transcription factor; C-term missing; [K]
KOG KOG3598 Thyroid hormone receptor-associated protein complex, subunit TRAP230; N-term missing; [K]
KOG KOG1245 Chromatin remodeling complex WSTF-ISWI, large subunit (contains heterochromatin localization, PHD and BROMO domains); N-term missing; [B]
KOG KOG1015 Transcription regulator XNP/ATRX, DEAD-box superfamily; C-term missing; [K]
KOG KOG1015 Transcription regulator XNP/ATRX, DEAD-box superfamily; N-term missing; [K]
KOG KOG0612 Rho-associated, coiled-coil containing protein kinase; N-term missing; C-term missing; [T]
KOG KOG1873 Ubiquitin-specific protease; N-term missing; C-term missing; [O]
MapolyID Mapoly0043s0132 -

Nomenclature

Gene symbol Product Transcript ID Status
Mpsnf1.4 Chromatin related protein Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g07390.1 chr1:7884709..7916407 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.