Mp1g08410



Description

Annotation

Database ID Description
Gene3D G3DSA:3.40.50.10810 -
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF00271 Helicase conserved C-terminal domain
ProSiteProfiles PS51192 Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile.
ProSiteProfiles PS51194 Superfamilies 1 and 2 helicase C-terminal domain profile.
Pfam PF00176 SNF2-related domain
SMART SM00490 helicmild6
Coils Coil Coil
CDD cd22254 CSB_WHD
SMART SM00487 ultradead3
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases
PANTHER PTHR45629 SNF2/RAD54 FAMILY MEMBER
Gene3D G3DSA:3.40.50.300 -
CDD cd18793 SF2_C_SNF
CDD cd18000 DEXHc_ERCC6
FunFam G3DSA:3.40.50.10810:FF:000034 Protein CHROMATIN REMODELING 8
KEGG K10841 DNA excision repair protein ERCC-6
KOG KOG0387 Transcription-coupled repair protein CSB/RAD26 (contains SNF2 family DNA-dependent ATPase domain); [KL]
KOG KOG0956 PHD finger protein AF10; N-term missing; [R]
MapolyID Mapoly0036s0084 -

Nomenclature

Gene symbol Product Transcript ID Status
Mpsnf1.5 Chromatin related protein Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g08410.1 chr1:8911121..8917888 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.