Mp1g09040



Description

Annotation

Database ID Description
SMART SM00025 pum_5
Gene3D G3DSA:4.10.1000.10 -
ProSiteProfiles PS50303 Pumilio homology domain (PUM-HD) profile.
Gene3D G3DSA:1.25.10.10 -
Pfam PF00806 Pumilio-family RNA binding repeat
PANTHER PTHR12537 RNA BINDING PROTEIN PUMILIO-RELATED
ProSiteProfiles PS50302 Pumilio RNA-binding repeat profile.
SMART SM00356 c3hfinal6
SUPERFAMILY SSF90229 CCCH zinc finger
Pfam PF18345 Zinc finger domain
SUPERFAMILY SSF48371 ARM repeat
ProSiteProfiles PS50103 Zinc finger C3H1-type profile.
MobiDBLite mobidb-lite consensus disorder prediction
FunFam G3DSA:1.25.10.10:FF:000237 Pumilio homolog 9
CDD cd07920 Pumilio
KEGG K17943 pumilio RNA-binding family
KOG KOG2049 Translational repressor MPT5/PUF4 and related RNA-binding proteins (Puf superfamily); N-term missing; [J]
KOG KOG2057 Predicted equilibrative nucleoside transporter protein; N-term missing; [F]
MapolyID Mapoly0036s0144 -

Nomenclature

Gene symbol Product Transcript ID Status
MpC3H5 transcription factor, C3H Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g09040.1 chr1:9604850..9611429 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.