Mp1g09420



Description

Annotation

Database ID Description
CDD cd00167 SANT
ProSiteProfiles PS51294 Myb-type HTH DNA-binding domain profile.
SUPERFAMILY SSF46689 Homeodomain-like
Gene3D G3DSA:1.10.10.60 -
MobiDBLite mobidb-lite consensus disorder prediction
FunFam G3DSA:1.10.10.60:FF:000001 MYB-related transcription factor
PANTHER PTHR10641 MYB FAMILY TRANSCRIPTION FACTOR
Pfam PF00249 Myb-like DNA-binding domain
ProSiteProfiles PS50090 Myb-like domain profile.
FunFam G3DSA:1.10.10.60:FF:000349 Transcription factor MYB39
SMART SM00717 sant
KEGG K09422 transcription factor MYB, plant
KOG KOG0048 Transcription factor, Myb superfamily; [K]
MapolyID Mapoly0096s0058 -

Nomenclature

Gene symbol Product Transcript ID Status
MpR2R3-MYB17 transcription factor, MYB Published
MpSBG9 transcription factor, MYB Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g09420.1 chr1:10016916..10020178 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g09420.2 chr1:10016916..10020178 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.