Mp1g10020



Description

Annotation

Database ID Description
Gene3D G3DSA:4.10.1100.10 -
PANTHER PTHR31251 SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4
MobiDBLite mobidb-lite consensus disorder prediction
ProSiteProfiles PS51141 Zinc finger SBP-type profile.
Pfam PF03110 SBP domain
SUPERFAMILY SSF103612 SBT domain
FunFam G3DSA:4.10.1100.10:FF:000001 Squamosa promoter-binding-like protein 14
MapolyID Mapoly0014s0224 -

Nomenclature

Gene symbol Product Transcript ID Status
MpSPL1 SQUAMOSA PROMOTER BINDING-LIKE, transcription factor Published

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g10020.1 chr1:10657036..10665338 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g10020.2 chr1:10657273..10665338 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g10020.3 chr1:10657221..10665322 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.