Mp1g10300



Description

Annotation

Database ID Description
ProSiteProfiles PS50103 Zinc finger C3H1-type profile.
SMART SM00356 c3hfinal6
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF00642 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
Gene3D G3DSA:4.10.1000.10 -
PANTHER PTHR12272 DEADENYLATION COMPLEX SUBUNIT PAN3
Coils Coil Coil
Gene3D G3DSA:1.10.287.3700 -
SUPERFAMILY SSF56112 Protein kinase-like (PK-like)
Gene3D G3DSA:6.10.250.3160 -
SUPERFAMILY SSF90229 CCCH zinc finger
Gene3D G3DSA:1.20.5.5160 -
FunFam G3DSA:1.10.287.3700:FF:000001 PAN2-PAN3 deadenylation complex subunit PAN3
Pfam PF18101 Pan3 Pseudokinase domain
KEGG K12572 PAB-dependent poly(A)-specific ribonuclease subunit 3
KOG KOG3741 Poly(A) ribonuclease subunit; N-term missing; [A]
KOG KOG1677 CCCH-type Zn-finger protein; N-term missing; C-term missing; [R]
MapolyID Mapoly0014s0196 -

Nomenclature

Gene symbol Product Transcript ID Status
MpC3H6 transcription factor, C3H Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g10300.1 chr1:10921056..10933505 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g10300.2 chr1:10921056..10933505 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.