Mp1g11730



Description

Annotation

Database ID Description
NCBIfam TIGR00756 pentatricopeptide repeat
Gene3D G3DSA:1.25.40.10 Tetratricopeptide repeat domain
ProSiteProfiles PS51375 Pentatricopeptide (PPR) repeat profile.
Pfam PF01535 PPR repeat
Pfam PF13041 PPR repeat family
Pfam PF12854 PPR repeat
PANTHER PTHR47942 TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATED
KOG KOG4422 Uncharacterized conserved protein; N-term missing; C-term missing; [S]
MapolyID Mapoly0014s0054 -

Nomenclature

Gene symbol Product Transcript ID Status
MpPPR_13 Pentatricopeptide repeat proteins Published

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g11730.1 chr1:12213831..12216950 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g11730.2 chr1:12213979..12217025 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.