Mp1g12840



Description

Annotation

Database ID Description
PANTHER PTHR13040 AUTOPHAGY PROTEIN 5
MobiDBLite mobidb-lite consensus disorder prediction
Gene3D G3DSA:3.10.20.90 -
Pfam PF04106 Autophagy protein ATG5, UblB domain
Pfam PF20637 Autophagy protein ATG5, alpha-helical bundle region
Gene3D G3DSA:3.10.20.620 -
Gene3D G3DSA:1.10.246.190 Autophagy protein Apg5, helix rich domain
Pfam PF20638 Autophagy protein ATG5, UblA domain
FunFam G3DSA:3.10.20.620:FF:000002 Autophagy protein 5
KEGG K08339 autophagy-related protein 5
KOG KOG2976 Protein involved in autophagy and nutrient starvation; C-term missing; [O]
MapolyID Mapoly0019s0054 -

Nomenclature

Gene symbol Product Transcript ID Status
MpATG5 Autophagy protein Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g12840.1 chr1:13261545..13266773 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g12840.2 chr1:13261638..13266758 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.