Mp1g12970



Description

Annotation

Database ID Description
KEGG K08493 vesicle transport through interaction with t-SNAREs 1
KOG KOG1666 V-SNARE; [U]
PIRSF PIRSF028865 Membrin-2
SUPERFAMILY SSF58038 SNARE fusion complex
Gene3D G3DSA:1.20.58.400 -
SUPERFAMILY SSF47661 t-snare proteins
CDD cd15862 SNARE_Vti1
PANTHER PTHR21230:SF67 VESICLE TRANSPORT V-SNARE 13-LIKE
PANTHER PTHR21230 VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATED
Pfam PF05008 Vesicle transport v-SNARE protein N-terminus
Coils Coil Coil
Pfam PF12352 Snare region anchored in the vesicle membrane C-terminus
Gene3D G3DSA:1.20.5.110 -
MapolyID Mapoly0019s0067 -

Nomenclature

Gene symbol Product Transcript ID Status
MpVTI1 Ortholog of Arabidopsis VTI1 genes Published

Expression Level powered by MBEX

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g12970.1 chr1:13096377..13101111 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g12970.2 chr1:13096377..13101312 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.