Mp1g13010



Description

Annotation

Database ID Description
FunFam G3DSA:1.10.10.60:FF:000060 MYB transcription factor
PANTHER PTHR47996 TRANSCRIPTION FACTOR DUO1
ProSiteProfiles PS51294 Myb-type HTH DNA-binding domain profile.
SUPERFAMILY SSF46689 Homeodomain-like
CDD cd00167 SANT
Gene3D G3DSA:1.10.10.60 -
MobiDBLite mobidb-lite consensus disorder prediction
SMART SM00717 sant
FunFam G3DSA:1.10.10.60:FF:000351 Transcription factor GAMYB
Pfam PF00249 Myb-like DNA-binding domain
ProSiteProfiles PS50090 Myb-like domain profile.
KOG KOG0048 Transcription factor, Myb superfamily; C-term missing; [K]
MapolyID Mapoly0019s0071 -

Nomenclature

Gene symbol Product Transcript ID Status
MpDUO1 R2R3-myb transcription factor, ortholog of Arabidopsis thaliana DUO1 Published
MpR2R3-MYB6 transcription factor, MYB Published

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g13010.1 chr1:13397454..13402569 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g13010.2 chr1:13397454..13402569 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.