Mp1g15400



Description

Annotation

Database ID Description
ProSiteProfiles PS50089 Zinc finger RING-type profile.
MobiDBLite mobidb-lite consensus disorder prediction
SMART SM00184 ring_2
Gene3D G3DSA:3.10.20.90 -
ProSitePatterns PS00518 Zinc finger RING-type signature.
Gene3D G3DSA:3.30.40.10 Zinc/RING finger domain, C3HC4 (zinc finger)
PANTHER PTHR46537 OS11G0578200 PROTEIN
SUPERFAMILY SSF57850 RING/U-box
Coils Coil Coil
Pfam PF13923 Zinc finger, C3HC4 type (RING finger)
CDD cd16531 RING-HC_RING1-like
KEGG K10695 E3 ubiquitin-protein ligase RNF1/2 [EC:2.3.2.27]
KOG KOG0311 Predicted E3 ubiquitin ligase; C-term missing; [O]
KOG KOG2660 Locus-specific chromosome binding proteins; N-term missing; C-term missing; [S]
MapolyID Mapoly0033s0121 -

Nomenclature

Gene symbol Product Transcript ID Status
MpRING1B3 Chromatin related protein Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g15400.1 chr1:16115123..16120149 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g15400.2 chr1:16114984..16119480 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.