Mp1g15680



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
CDD cd16531 RING-HC_RING1-like
Pfam PF13923 Zinc finger, C3HC4 type (RING finger)
Gene3D G3DSA:3.30.40.10 Zinc/RING finger domain, C3HC4 (zinc finger)
SMART SM00184 ring_2
PANTHER PTHR46537 OS11G0578200 PROTEIN
Gene3D G3DSA:3.10.20.90 -
ProSitePatterns PS00518 Zinc finger RING-type signature.
ProSiteProfiles PS50089 Zinc finger RING-type profile.
SUPERFAMILY SSF57850 RING/U-box
KEGG K10695 E3 ubiquitin-protein ligase RNF1/2 [EC:2.3.2.27]
KOG KOG0311 Predicted E3 ubiquitin ligase; C-term missing; [O]
MapolyID Mapoly0033s0093 -

Nomenclature

Gene symbol Product Transcript ID Status
MpRING1A Chromatin related protein Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g15680.1 chr1:16357865..16364490 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.