Mp1g17010



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
PANTHER PTHR10799 SNF2/RAD54 HELICASE FAMILY
SUPERFAMILY SSF47370 Bromodomain
Gene3D G3DSA:3.40.50.300 -
SMART SM00951 QLQ_2
Pfam PF00271 Helicase conserved C-terminal domain
ProSiteProfiles PS51194 Superfamilies 1 and 2 helicase C-terminal domain profile.
ProSiteProfiles PS51192 Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile.
Pfam PF00439 Bromodomain
Gene3D G3DSA:1.20.5.170 -
ProSiteProfiles PS51666 QLQ domain profile.
Coils Coil Coil
CDD cd18793 SF2_C_SNF
SMART SM00490 helicmild6
SMART SM00487 ultradead3
FunFam G3DSA:3.40.50.10810:FF:000017 ATP-dependent helicase BRM
PRINTS PR00503 Bromodomain signature
Pfam PF00176 SNF2-related domain
Gene3D G3DSA:1.20.920.10 -
Gene3D G3DSA:3.40.50.10810 -
SMART SM00297 bromo_6
ProSiteProfiles PS50014 Bromodomain profile.
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases
KOG KOG0386 Chromatin remodeling complex SWI/SNF, component SWI2 and related ATPases (DNA/RNA helicase superfamily); [BK]
KOG KOG1474 Transcription initiation factor TFIID, subunit BDF1 and related bromodomain proteins; N-term missing; C-term missing; [K]
KOG KOG2341 TATA box binding protein (TBP)-associated factor, RNA polymerase II; C-term missing; [K]
KOG KOG4701 Chitinase; N-term missing; [M]
MapolyID Mapoly0001s0041 -

Nomenclature

Gene symbol Product Transcript ID Status
Mpsnf1.7 Chromatin related protein Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g17010.1 chr1:17791512..17807704 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g17010.2 chr1:17791444..17807704 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.