Mp1g17790



Description

Annotation

Database ID Description
CDD cd19169 SET_SETD1
MobiDBLite mobidb-lite consensus disorder prediction
PANTHER PTHR45814 HISTONE-LYSINE N-METHYLTRANSFERASE SETD1
ProSiteProfiles PS50280 SET domain profile.
SUPERFAMILY SSF55277 GYF domain
ProSiteProfiles PS50829 GYF domain profile.
SMART SM00508 PostSET_3
Pfam PF00856 SET domain
SUPERFAMILY SSF82199 SET domain
Gene3D G3DSA:3.30.1490.40 -
Gene3D G3DSA:2.170.270.10 SET domain
ProSiteProfiles PS50868 Post-SET domain profile.
SMART SM00317 set_7
KEGG K11422 [histone H3]-lysine4 N-trimethyltransferase SETD1 [EC:2.1.1.354]
KOG KOG1080 Histone H3 (Lys4) methyltransferase complex, subunit SET1 and related methyltransferases; N-term missing; [BK]
KOG KOG1984 Vesicle coat complex COPII, subunit SFB3; C-term missing; [U]
KOG KOG0670 U4/U6-associated splicing factor PRP4; C-term missing; [A]
MapolyID Mapoly0001s0118 -

Nomenclature

Gene symbol Product Transcript ID Status
MpATXR2 Chromatin related protein Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g17790.1 chr1:18555456..18574660 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.