Mp1g20110



Description

Annotation

Database ID Description
Gene3D G3DSA:3.40.800.20 Histone deacetylase domain
MobiDBLite mobidb-lite consensus disorder prediction
PRINTS PR01270 Histone deacetylase superfamily signature
SUPERFAMILY SSF52768 Arginase/deacetylase
PANTHER PTHR10625 HISTONE DEACETYLASE HDAC1-RELATED
Pfam PF00850 Histone deacetylase domain
FunFam G3DSA:3.40.800.20:FF:000014 Histone deacetylase 15
ProSitePatterns PS01358 Zinc finger RanBP2-type signature.
KOG KOG1343 Histone deacetylase complex, catalytic component HDA1; N-term missing; [B]
KOG KOG4364 Chromatin assembly factor-I; N-term missing; C-term missing; [B]
MapolyID Mapoly0001s0348 -

Nomenclature

Gene symbol Product Transcript ID Status
MpHDAC3 Chromatin related protein Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g20110.1 chr1:21077616..21093573 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g20110.2 chr1:21077616..21093573 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g20110.3 chr1:21077616..21093573 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g20110.4 chr1:21077616..21093573 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.