Mp1g20280



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
Gene3D G3DSA:1.20.1270.220 -
SUPERFAMILY SSF47370 Bromodomain
ProSiteProfiles PS51525 NET domain profile.
PRINTS PR00503 Bromodomain signature
PANTHER PTHR46136 TRANSCRIPTION FACTOR GTE8
Pfam PF17035 Bromodomain extra-terminal - transcription regulation
Coils Coil Coil
ProSiteProfiles PS50014 Bromodomain profile.
SMART SM00297 bromo_6
CDD cd05506 Bromo_plant1
Gene3D G3DSA:1.20.920.10 -
Pfam PF00439 Bromodomain
KOG KOG1474 Transcription initiation factor TFIID, subunit BDF1 and related bromodomain proteins; N-term missing; [K]
MapolyID Mapoly0001s0365 -

Nomenclature

Gene symbol Product Transcript ID Status
MpBromo2 Chromatin related protein Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g20280.1 chr1:21294058..21300689 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g20280.2 chr1:21294058..21300515 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.