Mp1g20870



Description

Annotation

Database ID Description
Gene3D G3DSA:2.60.120.200 -
MobiDBLite mobidb-lite consensus disorder prediction
SUPERFAMILY SSF49899 Concanavalin A-like lectins/glucanases
FunFam G3DSA:2.60.120.200:FF:000025 Xyloglucan endotransglucosylase/hydrolase
Pfam PF00722 Glycosyl hydrolases family 16
CDD cd02176 GH16_XET
Pfam PF06955 Xyloglucan endo-transglycosylase (XET) C-terminus
ProSiteProfiles PS51762 Glycosyl hydrolases family 16 (GH16) domain profile.
PANTHER PTHR31062 XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED
KEGG K08235 xyloglucan:xyloglucosyl transferase [EC:2.4.1.207]
MapolyID Mapoly0001s0422 -

Nomenclature

Gene symbol Product Transcript ID Status
MpGH16.2 Cell wall related protein Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g20870.1 chr1:21882605..21886281 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.