| Database | ID | Description |
|---|---|---|
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain |
| ProSiteProfiles | PS51375 | Pentatricopeptide (PPR) repeat profile. |
| PANTHER | PTHR47936 | PPR_LONG DOMAIN-CONTAINING PROTEIN |
| NCBIfam | TIGR00756 | pentatricopeptide repeat |
| Pfam | PF13812 | Pentatricopeptide repeat domain |
| SUPERFAMILY | SSF48452 | TPR-like |
| SUPERFAMILY | SSF81901 | HCP-like |
| Pfam | PF13041 | PPR repeat family |
| Pfam | PF01535 | PPR repeat |
| KOG | KOG4422 | Uncharacterized conserved protein; N-term missing; C-term missing; [S] |
| KOG | KOG4422 | Uncharacterized conserved protein; N-term missing; C-term missing; [S] |
| KOG | KOG3941 | Intermediate in Toll signal transduction pathway (ECSIT); N-term missing; C-term missing; [T] |
| MapolyID | Mapoly0061s0076 | - |
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpPPR_39 | Pentatricopeptide repeat proteins | Published |
Caution: MBEX data are analyzed based on the v6.1 genome.
Link to the original image in MBEX
Sequences: |
Gene UTR + CDS + intron |
| >Mp1g24450.1 CGGATCGGAG GTCGATGCTC GATGGGAAGA CTGCTGCTGC TGCTGCGCGA GAAGCGAGCG CAGAGTTCGG CGGGCGCCAT GGCTTTACGA GGTCTGTGTC AGGTCTGACA GGTCCACTGT GAGAGCCAGT GATCGCCTTG TCTCGCCGTG GAATGAAGCT TCGGTCTCGT TCGTGAGTTT TGTTTCACCA TTCACGCGCG GTCATGGCTG TCTGCGAGTT GCAACTTGTC TCGTGGACGC TGGTCGCAGT CGATGGCGAT GACGGCTGGA TGGGTTGATT GAAGATGTTC ACGGTGATGG GAACAGGCCT GGGAGACTGT TGCTCGTGTG GAGCTGCTGA TGCTGCGTCC AGGGGCTGAA TTCGTGAGGT TGTGTGTTCG GCGGTTCGTG CTTGTTGGGA CCGGGGCAAC CGACTCCGAG GCTTGAGCAC GGAGCATGAG CTCTTGCTCG TGTGGAGCTG CTTGATGCCT TTGATGCAGA ATTCTCTGAA CAATGGAGGT AATGAGCTCG AGGTCGGTGT GGGGCAAGGT TCATGCTGGC TCCTTCAGCG GCCGTCAGGC AGTCACCAGA ATTTTCAGCG ACTGTACTTG TGCCCGAGCT GAAGCTGGTC GCGAGGTAAT CTCACAGGTT TTGGTGCCTT TAGGTTGACG TGTTCCCGCA TATGCTACTG CCTTTTGCTT TGGACATTCT TCCCCGAAAT TCGAATTTGG TTCTGCCGTC TTGGATTATT GCTGGGTGTT GGAATTATAA CATGTTCGTC GTTCGATGAT CATCAGGCCG ACTCACGAGA ATTTCGCTCT GGTGTAAAAG CGGTGGTCAT AGAACGCTCC TCGTCGTCCA GCGTTGAGGC CACCAGACGA CTTCCGTATG TTCGAAACGG GGCTGCTCCA AGACACGCAG GGCGATGGAT GCCGCAGCCA GATCATGACA TTAACCTCGA AGAGATCCTC AATTCTCTAA AAGGAACTGG ACGCGCTGAA GAACTGGATG AGGTCATGAG CAGGTGGACA GGAAAGCTTT CTTTCAGGCT CATGGTGACG TTGTTAAATC AGGAAAAGGA CTGGCAGAGA TCTCTGGCTC TCCACGACTG GATGTGCGAG AAAGGAGGAT ATCGACCATC AATTTTCTCC TACAACATCG TCCTCAGAAA TGTTCTGAAG GCCAGAAGGT GGACTCTCGG TGAAGGGCTG GTCGGGGAAA TGGTCCAGAA CGGAGTTGAG CCCGATAAGT TTACGTATTC CACTTTGATT AGTGCATTCG GGAAAGCTGG GAAATTTGAA TCCGCGCTAA TGTGGTTCCA AAAGATGGAG GAGAATGGAA TTGTACCGGA TTTGATCACC TACAGCACTC TCATCCAACT ATCCGGAAAG GTGAAGGATT TTGAAAGGGC TGTCTCTCTC TTCTCGAAAT TGAGGGCTTC AGGAATTCAA CCGGATCTTG TCGTGTTCAA TTCCATGATC AACATGTTTG GAAAAGCTAA ACTGTACAGA GAAGCGGAGA GTCTTCTCCA ACAGATGAAG TCGATGGGCA TCGAACCGGA CACCGTCACT TACAGTGTTT TGATCAATGC GTATGCCGAA TCAGAGAAAT ATGACGAGGC ACGGGAAGTG TTTACGGAAC TCAGAACCAA AGGCGTCGCT CTGGATTCCA CGACGTGTAA CATGATCATA GACGTGTATG GAAGATTGGG ATTAGTCAAA GAAGCAGAGG AACTATTCTG GGGCATGACG GAGTTGGGTG TATATCGCAA TGTTGTCACG TACAACACCA TGATCAAGGT CTATGGAGAA GCGGAGAGTC TTGCAGAAGC CTTTCGCTTG TATCACAGCA TGGAGAAGAA GGGGGTTCTG CCCAACATCG TGACCTACAA CACCGTGATG AAGCTCTTCG CTATGGTGAA CAACGAGGAG AAGGCCACGA GGTTATTGAA AAAAATAGAG AGCAGCGGTG TGGCGCCCAA TGCCATGACC TATTCCACGC TCATTTCAAT ATACGGAAAG ACGGGCAAGT TCGACAAGGC TGCGCTTCTC TTCCAAAGCC TTCGTGCGCG CGAATTTCCC ATGGATCACA TACTGTATCA AGCTATGGTT GTCGTGTACG AGAAGGCAGG GTTCATGGCT CATGCGAAGC GGCTGCTTCA AGAACTTCAG CATCCGGCTT CGGCGTCCCG GGATACGGCC ATCAATGTGC TTGCCAAGGC CGGCAAGCTC GAAGAGGCGG GCAAACTGTT TTTGAGCTCG TTCAAATCCG GCGACGTGAA GGACGTATCG GTGTTCAAGA ATATGATCGA CCTTCTCGCC AGCAACAAAA GATCCGCCCT CGTGGTCGAT GTGTATCGGA AGATGCGGCA AAGTGACTTT TTCCCGGACT CTCACATCTG CTACAAGGTG ATGGAGGCCT TCGGAAAACT CGGGCTCATG AAGGAAGCGG AGGAGGTGTA TCTGGAGATG AAAGCCAATG GCTATGTGCT GAGCGAAGAA TGCCATTGGC TCATGATGGA GCTCTACGGA AATTTTGGCG ACATCGAGGC GGCTGAACAG CTTTTCGAGC AGCTCAAGTC TGAGGGTGAT TTGTCCGATA ATCTGATTCA CCTCAGCATG TCCCGTGTAT ACGAGCGAGC GAACAGGCTC GACGACGCAT CCAAAGTGTT TCAAGAAATG AAACTCAGAG AAAACGCGCC ACCCTAAAAA CTCCTCAAGT AGGTTACAGC AAAAGCTCGA AATCTCGTCC ACTCTGTACA ATGCTGACCT TCACAGTTCT CCACACCTGT TGTTATTGTG TCAAATACCG AAGCACATTG ATAGACTCAC TCGCTATGGA TTTCGAAATT CGCCCGGATG GTCAAACCTC CCGCTGCGAA ATTGTACACA CTGCCCAGTG TTCACCGAGA AGTGGCACGA TATTTTCAGT CCTGTCTGTC CATGTCTGAG TCACAGAACT TGAATTCTTC ATAGAAGTCG GCCAAATGTG CTTCAGGTGC ACACGAGATG TCGTCTCACG GTGGAGGAAT GCTTTCTCTG GACGTCTGTA TACTGTCGAG AGGCCACTGT CTCACAGTCA AAATCTCTCG ACAAATTCCT CCTATTGTCA CATGACAGTT CAGAGCGATT ACGAGCTTGG GCTAACATGG AGAAGATTTG GCGAGATTTC CCAGCGGTTC CTAGTTATTT ACACTGCGGT CGTGTGAGGA CATACCAGGA TTATCGCCCT GCCCCATTAG TATCCTTGTG TACAAATATG TACCATCGCC ATTGATAAAG CAATATTTTT TACTGACTTT |
mRNA UTR + CDS |
| >Mp1g24450.1 CGGATCGGAG GTCGATGCTC GATGGGAAGA CTGCTGCTGC TGCTGCGCGA GAAGCGAGCG CAGAGTTCGG CGGGCGCCAT GGCTTTACGA GGTCTGTGTC AGGTCTGACA GGTCCACTGT GAGAGCCAGT GATCGCCTTG TCTCGCCGTG GAATGAAGCT TCGGTCTCGT TCGTGAGTTT TGTTTCACCA TTCACGCGCG GTCATGGCTG TCTGCGAGTT GCAACTTGTC TCGTGGACGC TGGTCGCAGT CGATGGCGAT GACGGCTGGA TGGGTTGATT GAAGATGTTC ACGGTGATGG GAACAGGCCT GGGAGACTGT TGCTCGTGTG GAGCTGCTGA TGCTGCGTCC AGGGGCTGAA TTCGTGAGGT TGTGTGTTCG GCGGTTCGTG CTTGTTGGGA CCGGGGCAAC CGACTCCGAG GCTTGAGCAC GGAGCATGAG CTCTTGCTCG TGTGGAGCTG CTTGATGCCT TTGATGCAGA ATTCTCTGAA CAATGGAGGT AATGAGCTCG AGGTCGGTGT GGGGCAAGGT TCATGCTGGC TCCTTCAGCG GCCGTCAGGC AGTCACCAGA ATTTTCAGCG ACTGTACTTG TGCCCGAGCT GAAGCTGGTC GCGAGGCCGA CTCACGAGAA TTTCGCTCTG GTGTAAAAGC GGTGGTCATA GAACGCTCCT CGTCGTCCAG CGTTGAGGCC ACCAGACGAC TTCCGTATGT TCGAAACGGG GCTGCTCCAA GACACGCAGG GCGATGGATG CCGCAGCCAG ATCATGACAT TAACCTCGAA GAGATCCTCA ATTCTCTAAA AGGAACTGGA CGCGCTGAAG AACTGGATGA GGTCATGAGC AGGTGGACAG GAAAGCTTTC TTTCAGGCTC ATGGTGACGT TGTTAAATCA GGAAAAGGAC TGGCAGAGAT CTCTGGCTCT CCACGACTGG ATGTGCGAGA AAGGAGGATA TCGACCATCA ATTTTCTCCT ACAACATCGT CCTCAGAAAT GTTCTGAAGG CCAGAAGGTG GACTCTCGGT GAAGGGCTGG TCGGGGAAAT GGTCCAGAAC GGAGTTGAGC CCGATAAGTT TACGTATTCC ACTTTGATTA GTGCATTCGG GAAAGCTGGG AAATTTGAAT CCGCGCTAAT GTGGTTCCAA AAGATGGAGG AGAATGGAAT TGTACCGGAT TTGATCACCT ACAGCACTCT CATCCAACTA TCCGGAAAGG TGAAGGATTT TGAAAGGGCT GTCTCTCTCT TCTCGAAATT GAGGGCTTCA GGAATTCAAC CGGATCTTGT CGTGTTCAAT TCCATGATCA ACATGTTTGG AAAAGCTAAA CTGTACAGAG AAGCGGAGAG TCTTCTCCAA CAGATGAAGT CGATGGGCAT CGAACCGGAC ACCGTCACTT ACAGTGTTTT GATCAATGCG TATGCCGAAT CAGAGAAATA TGACGAGGCA CGGGAAGTGT TTACGGAACT CAGAACCAAA GGCGTCGCTC TGGATTCCAC GACGTGTAAC ATGATCATAG ACGTGTATGG AAGATTGGGA TTAGTCAAAG AAGCAGAGGA ACTATTCTGG GGCATGACGG AGTTGGGTGT ATATCGCAAT GTTGTCACGT ACAACACCAT GATCAAGGTC TATGGAGAAG CGGAGAGTCT TGCAGAAGCC TTTCGCTTGT ATCACAGCAT GGAGAAGAAG GGGGTTCTGC CCAACATCGT GACCTACAAC ACCGTGATGA AGCTCTTCGC TATGGTGAAC AACGAGGAGA AGGCCACGAG GTTATTGAAA AAAATAGAGA GCAGCGGTGT GGCGCCCAAT GCCATGACCT ATTCCACGCT CATTTCAATA TACGGAAAGA CGGGCAAGTT CGACAAGGCT GCGCTTCTCT TCCAAAGCCT TCGTGCGCGC GAATTTCCCA TGGATCACAT ACTGTATCAA GCTATGGTTG TCGTGTACGA GAAGGCAGGG TTCATGGCTC ATGCGAAGCG GCTGCTTCAA GAACTTCAGC ATCCGGCTTC GGCGTCCCGG GATACGGCCA TCAATGTGCT TGCCAAGGCC GGCAAGCTCG AAGAGGCGGG CAAACTGTTT TTGAGCTCGT TCAAATCCGG CGACGTGAAG GACGTATCGG TGTTCAAGAA TATGATCGAC CTTCTCGCCA GCAACAAAAG ATCCGCCCTC GTGGTCGATG TGTATCGGAA GATGCGGCAA AGTGACTTTT TCCCGGACTC TCACATCTGC TACAAGGTGA TGGAGGCCTT CGGAAAACTC GGGCTCATGA AGGAAGCGGA GGAGGTGTAT CTGGAGATGA AAGCCAATGG CTATGTGCTG AGCGAAGAAT GCCATTGGCT CATGATGGAG CTCTACGGAA ATTTTGGCGA CATCGAGGCG GCTGAACAGC TTTTCGAGCA GCTCAAGTCT GAGGGTGATT TGTCCGATAA TCTGATTCAC CTCAGCATGT CCCGTGTATA CGAGCGAGCG AACAGGCTCG ACGACGCATC CAAAGTGTTT CAAGAAATGA AACTCAGAGA AAACGCGCCA CCCTAAAAAC TCCTCAAGTA GGTTACAGCA AAAGCTCGAA ATCTCGTCCA CTCTGTACAA TGCTGACCTT CACAGTTCTC CACACCTGTT GTTATTGTGT CAAATACCGA AGCACATTGA TAGACTCACT CGCTATGGAT TTCGAAATTC GCCCGGATGG TCAAACCTCC CGCTGCGAAA TTGTACACAC TGCCCAGTGT TCACCGAGAA GTGGCACGAT ATTTTCAGTC CTGTCTGTCC ATGTCTGAGT CACAGAACTT GAATTCTTCA TAGAAGTCGG CCAAATGTGC TTCAGGTGCA CACGAGATGT CGTCTCACGG TGGAGGAATG CTTTCTCTGG ACGTCTGTAT ACTGTCGAGA GGCCACTGTC TCACAGTCAA AATCTCTCGA CAAATTCCTC CTATTGTCAC ATGACAGTTC AGAGCGATTA CGAGCTTGGG CTAACATGGA GAAGATTTGG CGAGATTTCC CAGCGGTTCC TAGTTATTTA CACTGCGGTC GTGTGAGGAC ATACCAGGAT TATCGCCCTG CCCCATTAGT ATCCTTGTGT ACAAATATGT ACCATCGCCA TTGATAAAGC AATATTTTTT ACTGACTTT |
CDS |
| >Mp1g24450.1 ATGGAGGTAA TGAGCTCGAG GTCGGTGTGG GGCAAGGTTC ATGCTGGCTC CTTCAGCGGC CGTCAGGCAG TCACCAGAAT TTTCAGCGAC TGTACTTGTG CCCGAGCTGA AGCTGGTCGC GAGGCCGACT CACGAGAATT TCGCTCTGGT GTAAAAGCGG TGGTCATAGA ACGCTCCTCG TCGTCCAGCG TTGAGGCCAC CAGACGACTT CCGTATGTTC GAAACGGGGC TGCTCCAAGA CACGCAGGGC GATGGATGCC GCAGCCAGAT CATGACATTA ACCTCGAAGA GATCCTCAAT TCTCTAAAAG GAACTGGACG CGCTGAAGAA CTGGATGAGG TCATGAGCAG GTGGACAGGA AAGCTTTCTT TCAGGCTCAT GGTGACGTTG TTAAATCAGG AAAAGGACTG GCAGAGATCT CTGGCTCTCC ACGACTGGAT GTGCGAGAAA GGAGGATATC GACCATCAAT TTTCTCCTAC AACATCGTCC TCAGAAATGT TCTGAAGGCC AGAAGGTGGA CTCTCGGTGA AGGGCTGGTC GGGGAAATGG TCCAGAACGG AGTTGAGCCC GATAAGTTTA CGTATTCCAC TTTGATTAGT GCATTCGGGA AAGCTGGGAA ATTTGAATCC GCGCTAATGT GGTTCCAAAA GATGGAGGAG AATGGAATTG TACCGGATTT GATCACCTAC AGCACTCTCA TCCAACTATC CGGAAAGGTG AAGGATTTTG AAAGGGCTGT CTCTCTCTTC TCGAAATTGA GGGCTTCAGG AATTCAACCG GATCTTGTCG TGTTCAATTC CATGATCAAC ATGTTTGGAA AAGCTAAACT GTACAGAGAA GCGGAGAGTC TTCTCCAACA GATGAAGTCG ATGGGCATCG AACCGGACAC CGTCACTTAC AGTGTTTTGA TCAATGCGTA TGCCGAATCA GAGAAATATG ACGAGGCACG GGAAGTGTTT ACGGAACTCA GAACCAAAGG CGTCGCTCTG GATTCCACGA CGTGTAACAT GATCATAGAC GTGTATGGAA GATTGGGATT AGTCAAAGAA GCAGAGGAAC TATTCTGGGG CATGACGGAG TTGGGTGTAT ATCGCAATGT TGTCACGTAC AACACCATGA TCAAGGTCTA TGGAGAAGCG GAGAGTCTTG CAGAAGCCTT TCGCTTGTAT CACAGCATGG AGAAGAAGGG GGTTCTGCCC AACATCGTGA CCTACAACAC CGTGATGAAG CTCTTCGCTA TGGTGAACAA CGAGGAGAAG GCCACGAGGT TATTGAAAAA AATAGAGAGC AGCGGTGTGG CGCCCAATGC CATGACCTAT TCCACGCTCA TTTCAATATA CGGAAAGACG GGCAAGTTCG ACAAGGCTGC GCTTCTCTTC CAAAGCCTTC GTGCGCGCGA ATTTCCCATG GATCACATAC TGTATCAAGC TATGGTTGTC GTGTACGAGA AGGCAGGGTT CATGGCTCAT GCGAAGCGGC TGCTTCAAGA ACTTCAGCAT CCGGCTTCGG CGTCCCGGGA TACGGCCATC AATGTGCTTG CCAAGGCCGG CAAGCTCGAA GAGGCGGGCA AACTGTTTTT GAGCTCGTTC AAATCCGGCG ACGTGAAGGA CGTATCGGTG TTCAAGAATA TGATCGACCT TCTCGCCAGC AACAAAAGAT CCGCCCTCGT GGTCGATGTG TATCGGAAGA TGCGGCAAAG TGACTTTTTC CCGGACTCTC ACATCTGCTA CAAGGTGATG GAGGCCTTCG GAAAACTCGG GCTCATGAAG GAAGCGGAGG AGGTGTATCT GGAGATGAAA GCCAATGGCT ATGTGCTGAG CGAAGAATGC CATTGGCTCA TGATGGAGCT CTACGGAAAT TTTGGCGACA TCGAGGCGGC TGAACAGCTT TTCGAGCAGC TCAAGTCTGA GGGTGATTTG TCCGATAATC TGATTCACCT CAGCATGTCC CGTGTATACG AGCGAGCGAA CAGGCTCGAC GACGCATCCA AAGTGTTTCA AGAAATGAAA CTCAGAGAAA ACGCGCCACC CTAA |
Protein |
| >Mp1g24450.1 MEVMSSRSVW GKVHAGSFSG RQAVTRIFSD CTCARAEAGR EADSREFRSG VKAVVIERSS SSSVEATRRL PYVRNGAAPR HAGRWMPQPD HDINLEEILN SLKGTGRAEE LDEVMSRWTG KLSFRLMVTL LNQEKDWQRS LALHDWMCEK GGYRPSIFSY NIVLRNVLKA RRWTLGEGLV GEMVQNGVEP DKFTYSTLIS AFGKAGKFES ALMWFQKMEE NGIVPDLITY STLIQLSGKV KDFERAVSLF SKLRASGIQP DLVVFNSMIN MFGKAKLYRE AESLLQQMKS MGIEPDTVTY SVLINAYAES EKYDEAREVF TELRTKGVAL DSTTCNMIID VYGRLGLVKE AEELFWGMTE LGVYRNVVTY NTMIKVYGEA ESLAEAFRLY HSMEKKGVLP NIVTYNTVMK LFAMVNNEEK ATRLLKKIES SGVAPNAMTY STLISIYGKT GKFDKAALLF QSLRAREFPM DHILYQAMVV VYEKAGFMAH AKRLLQELQH PASASRDTAI NVLAKAGKLE EAGKLFLSSF KSGDVKDVSV FKNMIDLLAS NKRSALVVDV YRKMRQSDFF PDSHICYKVM EAFGKLGLMK EAEEVYLEMK ANGYVLSEEC HWLMMELYGN FGDIEAAEQL FEQLKSEGDL SDNLIHLSMS RVYERANRLD DASKVFQEMK LRENAPP |