| Database | ID | Description |
|---|---|---|
| Gene3D | G3DSA:3.30.160.270 | - |
| ProSitePatterns | PS00815 | Alpha-isopropylmalate and homocitrate synthases signature 1. |
| FunFam | G3DSA:3.30.160.270:FF:000004 | 2-isopropylmalate synthase B |
| FunFam | G3DSA:3.20.20.70:FF:000010 | 2-isopropylmalate synthase |
| Gene3D | G3DSA:3.20.20.70 | Aldolase class I |
| FunFam | G3DSA:1.10.238.260:FF:000003 | 2-isopropylmalate synthase 1 chloroplastic |
| NCBIfam | TIGR00973 | 2-isopropylmalate synthase |
| Gene3D | G3DSA:1.10.238.260 | - |
| Pfam | PF08502 | LeuA allosteric (dimerisation) domain |
| Pfam | PF00682 | HMGL-like |
| CDD | cd07940 | DRE_TIM_IPMS |
| SUPERFAMILY | SSF110921 | 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain |
| Hamap | MF_01025 | 2-isopropylmalate synthase [leuA]. |
| ProSiteProfiles | PS50991 | Pyruvate carboxyltransferase domain. |
| SMART | SM00917 | LeuA_dimer_2 |
| PANTHER | PTHR10277 | HOMOCITRATE SYNTHASE-RELATED |
| SUPERFAMILY | SSF51569 | Aldolase |
| KEGG | K01649 | 2-isopropylmalate synthase [EC:2.3.3.13] |
| KOG | KOG2367 | Alpha-isopropylmalate synthase/homocitrate synthase; [E] |
| MapolyID | Mapoly0002s0332 | - |
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpMLS1a | organic acid biosynthesis and exudation | Provisional |
Caution: MBEX data are analyzed based on the v6.1 genome.
Link to the original image in MBEX
Sequences: |
Gene UTR + CDS + intron |
| >Mp1g25400.1 GGAGCACGAG CCAAGGCCCG CCGCTCTTGC TCGACTTGCT TTTGTGCAAT CCGGCCTCAA GACGAGGGCA TTCGAGCGAG CGCGCTCGTC CTTGTTTCAA TCTCAGTGCC CGCATCGGGA GGCTCGTCTT TCTCAGGCCG CAGGCTCTGC CTTGTCGTTG TTGTTGCATC CGCCAGGTGG TTTCGGCATT TCGACGACTC AAGCGCTCTG CGCTCACCTC GCGCGACGTG GTGGTGGTGG TGGTGGTGAG GATGGCGGGC GTGAATGTGG CCACCGTCGT GTCTCAATTT CCGAAGGGTG TCGAGGATGT GAGAGTGGGC GGGGTGGCGC CTTTCGCCTT CGCCCCGTCT CGCGTTTGTT CGAGTTCATC TCTCTCTAGG GCGTCGTTCG CCTTGAGAGG GAAGGAATTC GCGTCCATTT TTAGGACGGA TCAGAGCGCC TGGAGCAGGA GGAAATCGGT GCAGGGAGGT GTTCTCGTTC GTGCCTCCTC GGGCGAGAGG AAGCGGCCCA AGTACATCCC CAATAAGATC GATGACCCCA ATTATGTTCG AATTTTCGAC ACCACTTTGA GAGACGGCGA ACAGTCTCCC GGAGCCAGTC TGACCAGTAA AGAGAAGCTG GACATTGCAC GTCAGCTCGC CAAATTGGGG GTGGACATCA TCGAAGCTGG TTATCCCAGG TCGTCACCGG ACGATCTGGA AGCTGTCAAA ATGATCGCCA AGGAAGTAGG GAATCATGTG GATGACGATG GATATGTTCC TGTTATTTGT GGTTTATCCC GGTGCAACAA GGCAGACATT GACGCAGCTT GGGAAGGAGT GAAGCACGCT CTGCGACCCA GGATTCATAC CTTTATCGCC ACCAGTGAAA TTCACATGCA GCACAAGCTC CGCAAGACCC CAGAAGAGGT AATCCAAATT GCGTCGGAGA TGGTAGCGTA TGCTCGGAGC TTGGGCTGCG ACGACGTGGA GTTCAGTCCG GAAGATGCTG GGAGGTATGA CTTGGTTCAG CTGCCACCAC CACTGTCTGT CACGGGTCCG TTCGCTCTGA AAGTACACGC CCTTTCACAC ATAAGAGCTA ATTTGCATGC TGGAGCTAAC ACGACCGAGT TGGCCGGTTC TCAGGTCTGA TCCAGAGTTT CTCTACCGAA TTTTGTCCGA AGTAATTAAA GCTGGAGCCA CCACTCTTAA TATTCCAGAC ACTGTTGGCT ATACATTACC CGTCGAATTC GGGGGACTGA TTGCTAAAAT CAAAGCCAAC ACTCCTGGAG CTGAGAATGT GATAATCTCC ACGCATTGCC AAAATGATTT GGGTCTGGCC ACAGCCAACA CACTCTCAGT AAGCTACTTC TGGACCATTT GCATGTGTGG TCGCAAGCAT TATGTCCTCT ACTCATAATA TGGCAATGTA CGGCCCACGG AGTCATCGCG TTTGTCTGCT GCACTGTATC ATCCTGTTTG TTGAAGGTTT CAAGTCCGTG TTATTATCTG CACTTTGGTT TGCGACGATA CAACACAGTG CTCGCTGTTC TGTCTCGATT GTATACGTTC GATATTTCTT GGTATTATTT TGTATCTAGT TTTGTTGCAC GTTTCATATA CTCCACTACC TTTGACCTGT CTCAAGAAAG AACGGTGTTA TTCTCTTCAA CAACATTCTA TCGATCACAT TTATAGGTAT GTGAATGAAT ATAGGACTCT TTCCAGGAAC TTCTTGAAGC CATTATTGAA GTGTTCTTAT GTCTTCTCCA GGGTGCATAC AATGGTGCTA GACAAGTGGA GGTTACCATT AATGGAATCG GTGAGCGTGC TGGTAATGCT TCGCTTGAAG AGGTATCTAT TTTACAACGT CATGAGCTTA TGCCCTGTTG ACGTTGTGGT TGTAAGCCTT TGACGGTTGT AAGCCATTGT AATGTTCGAA GTATTCGTGA TGACCTACTT GCATTCCAGG TTAATACCTT AATAACCTGC TAGCCTAACT TTTTATTCTC CGCTAATAAC AGGTCGTTAT GGCAATCAAG TGCCGAGGAG ATCAGCTTCT CGGAGGCCTT CACACCGGGA TCGTCACAAA GCATATCTCA GTGGCGAGTC GAATGGTACG ATACCCAACC TGACTAGTAA CTTCTTTCCA GAGCTGTTTG TTTACTTGCA ATTCTCAATC GATGTAATGT CTATTGTACC CCTTGGCGTT GACATTTAAC TACTTGTCTT TGCAGGTTTC CGATCTTACA GGAATGGTTG TTCAACCCCA TAAGGCGATT GTGGGAGCGA ATGCTTTTGC TCATGAAAGT GGTATCCATC AGGTAAAATT TCGAAGGGTG TCATTGTTCC TCAATACTAA AACATGACCC TCAGTATCTG TGAGAGTTTC CTAAGTCGAC TGTTTTGGAT CTGAAATCTA ATTCAATAAT CACATGCAGG ATGGTATGCT CAAGTTCAAA GGCACCTACG AAATCATGTC TCCGGATGAA ATTGGACTCG TCCGGTCAGA CGACGCTGGT TTAGTGCTTG GCAAGTTGAG GTAACATACA TCAAGTGTGC TGGAATACTC GCCAAAATGT ATTATCCTTG ATTTACAAGT TCACCTCATT GTTTCTACGT GCTGACTGTA CTGTATATTG TGTCGTTTGT TGTCATATTT TGCGTGGAAT AGTGGAAGGC ATGCATTGAA GACGCGTTTA CAGCAGGTAA ATAAGTCTTG TGATGGTGCT TTAGCCTACG AATTTTGTGG ATGACCTGAT TCATATGAAG ACTCAGTCTA TTCTTTGATG TTCAAGGCTT TTTCGCAACT ATATATAGAT GTATGTCAAT GTACGTGATT GTTTGAAGTT ATCGACATAT GTCTAACTTT CAGTCTGTTT TCTCAGCTGG GATATGAGCT TGAAGGTAAA AAGCTGGATG ATGTCTTCAA GCGCTTCAAA GCCGTCGCAG AGAAGAAGAA GGTTTGTAAG CTCGACCTTT GTGGCTTGTG AAGGCATAAC ATTACGAGTT CATATTCCTC CTTCCCTTGC GAATCTCACG TTGTTTTTGT AGCTGGTAAA CCCTGGTGTT TGAACTTGAA GAGCTGCATA TCTGTGACAT TCGGAAAGTA CTCAAGGATG CATATAAAAG AGTATTTATG TATGCTGGTT GTATCTGTCT ATACTGTGAT AGTTCTGGAT GAGACTGCGC TCTGTCCAGG TTTCTCAGTG CAGGAGGGAT TAGGATGTGC TCTCTCTTAT CTTCCATTTA AACGGTTTGT AGGTTCTGAA TATGAATGCG AATGTGGTGA TTTTCGGGGA TGGGAAAATT TCGAGTTTTC ATGGATTGAA CTGTCTTGCA GACTGTGGCC GATGAAGATT TAGAAGCTCT TCTTTCTGAT GAGGTCCATC AACCTGCTAC GATCTGGTCG TTACTTGATT TGCAGGTACT GTGTCTGACT TTCATGCCTG TCGCCTAATG ACTAATGTGT ATGAGAGAAA TTATGTGTAT GACGATCCTA ATCAGGTATT TTCTCATTTC AGGTTGTTTG TGGTACAATG GGACTTTCAA CGGCCACTGT AAAGCTAGTG GGACCTGATG GTGCCCAGAT GATTGGGTCG TGCATTGGTA CAGGTCCTGT GGATGCAGCC TACAAAGCTG TCGATCAGAT AGTGAAGGTC TGCTTCATTT CCCTTCACTT GAAGTTTGTC TGATTGTCCT GGTATCAGGG TCCGTGATGC TTTCGCAACC GCGGTTTATG TCCTAGTATG CCATAAGAAG CCCCATTCAT TAGCACATTT AGTAATATGA TACGGGAAGA CCTTTTGTTC TGAATAATAA GCTGTTTCCA GTACACTGAG CTTCGCAGCA TCCAAGTACA TGCATCGTAT ACACAACTTT TCTCAAGTCT GCCTCATTTT GAGCTGACAA AACCAGAATT TAAGGCTGAT TTTATGTATG AAACACCTTT TTGGATTTGT AGGAACCAGT CACTCTTTTG GAGTATTCCA TGAACTCTGT CACAGAAGGT ATTGATGCAA TTGCACATAC AAGAGTTGTG CTGAGGGCCG AAAATTCCTA CTCAGTTAAG CATCCCCAGT CAGGACAGTC GGTACAACGA TCTTTCAGGT ATGATCTTTT ACCTTTTGAC TAGCATAACT TCTCTGAAAG TCTCGTCAGA CTTCAAGTGG CCTTTGTAAG TCGGTGGTTG AGTGTAACGT GAACGTCTGA GTGGATTAGG CATGACGATT GACCTTATGA CTTTTCATTT GTCGTTCGTC ACTCAGCTCA CAATTCTTTG TCCTTTTGTC TGCAGTGGTT CTGGTGCAGG AGAGGATGTT GTTGTTTCAA GCGTAAGAGC GTATGTTAGT GCTTTGAACA AGATTCTAGG TTTCCAAATT AGCCGTCCAT CTGTGACATC TGCCAGGTCT GAAGAACCTC GAGTTGCCGC TTAATCTTCG ACAGAGGTTT TTTGCTCATC GTACTGCCTT CGTTTGAGAT ATTATTTTTA GTCAGGATAG GAAAGTTCTA AGAATCTGTA GCACCGTGAA ACGTTTTGAG AGCTTGAATT GACCAGTCGA ATTTGGAAAC CTTGTTTCTT TTGTAATTGT AGTGGCCAGA TTCAAAGTTG GTCAGAATAT GAAAGAGTGT CCGAGAAATT TTCCCAGGCA TAAAAGAATT TACCTCTGCT GATGTAATGA GCTTCAGTTA ATAGATTTGT CGGTGGTTAT TGTG |
mRNA UTR + CDS |
| >Mp1g25400.1 GGAGCACGAG CCAAGGCCCG CCGCTCTTGC TCGACTTGCT TTTGTGCAAT CCGGCCTCAA GACGAGGGCA TTCGAGCGAG CGCGCTCGTC CTTGTTTCAA TCTCAGTGCC CGCATCGGGA GGCTCGTCTT TCTCAGGCCG CAGGCTCTGC CTTGTCGTTG TTGTTGCATC CGCCAGGTGG TTTCGGCATT TCGACGACTC AAGCGCTCTG CGCTCACCTC GCGCGACGTG GTGGTGGTGG TGGTGGTGAG GATGGCGGGC GTGAATGTGG CCACCGTCGT GTCTCAATTT CCGAAGGGTG TCGAGGATGT GAGAGTGGGC GGGGTGGCGC CTTTCGCCTT CGCCCCGTCT CGCGTTTGTT CGAGTTCATC TCTCTCTAGG GCGTCGTTCG CCTTGAGAGG GAAGGAATTC GCGTCCATTT TTAGGACGGA TCAGAGCGCC TGGAGCAGGA GGAAATCGGT GCAGGGAGGT GTTCTCGTTC GTGCCTCCTC GGGCGAGAGG AAGCGGCCCA AGTACATCCC CAATAAGATC GATGACCCCA ATTATGTTCG AATTTTCGAC ACCACTTTGA GAGACGGCGA ACAGTCTCCC GGAGCCAGTC TGACCAGTAA AGAGAAGCTG GACATTGCAC GTCAGCTCGC CAAATTGGGG GTGGACATCA TCGAAGCTGG TTATCCCAGG TCGTCACCGG ACGATCTGGA AGCTGTCAAA ATGATCGCCA AGGAAGTAGG GAATCATGTG GATGACGATG GATATGTTCC TGTTATTTGT GGTTTATCCC GGTGCAACAA GGCAGACATT GACGCAGCTT GGGAAGGAGT GAAGCACGCT CTGCGACCCA GGATTCATAC CTTTATCGCC ACCAGTGAAA TTCACATGCA GCACAAGCTC CGCAAGACCC CAGAAGAGGT AATCCAAATT GCGTCGGAGA TGGTAGCGTA TGCTCGGAGC TTGGGCTGCG ACGACGTGGA GTTCAGTCCG GAAGATGCTG GGAGGTCTGA TCCAGAGTTT CTCTACCGAA TTTTGTCCGA AGTAATTAAA GCTGGAGCCA CCACTCTTAA TATTCCAGAC ACTGTTGGCT ATACATTACC CGTCGAATTC GGGGGACTGA TTGCTAAAAT CAAAGCCAAC ACTCCTGGAG CTGAGAATGT GATAATCTCC ACGCATTGCC AAAATGATTT GGGTCTGGCC ACAGCCAACA CACTCTCAGG TGCATACAAT GGTGCTAGAC AAGTGGAGGT TACCATTAAT GGAATCGGTG AGCGTGCTGG TAATGCTTCG CTTGAAGAGG TCGTTATGGC AATCAAGTGC CGAGGAGATC AGCTTCTCGG AGGCCTTCAC ACCGGGATCG TCACAAAGCA TATCTCAGTG GCGAGTCGAA TGGTTTCCGA TCTTACAGGA ATGGTTGTTC AACCCCATAA GGCGATTGTG GGAGCGAATG CTTTTGCTCA TGAAAGTGGT ATCCATCAGG ATGGTATGCT CAAGTTCAAA GGCACCTACG AAATCATGTC TCCGGATGAA ATTGGACTCG TCCGGTCAGA CGACGCTGGT TTAGTGCTTG GCAAGTTGAG TGGAAGGCAT GCATTGAAGA CGCGTTTACA GCAGCTGGGA TATGAGCTTG AAGGTAAAAA GCTGGATGAT GTCTTCAAGC GCTTCAAAGC CGTCGCAGAG AAGAAGAAGA CTGTGGCCGA TGAAGATTTA GAAGCTCTTC TTTCTGATGA GGTCCATCAA CCTGCTACGA TCTGGTCGTT ACTTGATTTG CAGGTTGTTT GTGGTACAAT GGGACTTTCA ACGGCCACTG TAAAGCTAGT GGGACCTGAT GGTGCCCAGA TGATTGGGTC GTGCATTGGT ACAGGTCCTG TGGATGCAGC CTACAAAGCT GTCGATCAGA TAGTGAAGGA ACCAGTCACT CTTTTGGAGT ATTCCATGAA CTCTGTCACA GAAGGTATTG ATGCAATTGC ACATACAAGA GTTGTGCTGA GGGCCGAAAA TTCCTACTCA GTTAAGCATC CCCAGTCAGG ACAGTCGGTA CAACGATCTT TCAGTGGTTC TGGTGCAGGA GAGGATGTTG TTGTTTCAAG CGTAAGAGCG TATGTTAGTG CTTTGAACAA GATTCTAGGT TTCCAAATTA GCCGTCCATC TGTGACATCT GCCAGGTCTG AAGAACCTCG AGTTGCCGCT TAATCTTCGA CAGAGGTTTT TTGCTCATCG TACTGCCTTC GTTTGAGATA TTATTTTTAG TCAGGATAGG AAAGTTCTAA GAATCTGTAG CACCGTGAAA CGTTTTGAGA GCTTGAATTG ACCAGTCGAA TTTGGAAACC TTGTTTCTTT TGTAATTGTA GTGGCCAGAT TCAAAGTTGG TCAGAATATG AAAGAGTGTC CGAGAAATTT TCCCAGGCAT AAAAGAATTT ACCTCTGCTG ATGTAATGAG CTTCAGTTAA TAGATTTGTC GGTGGTTATT GTG |
CDS |
| >Mp1g25400.1 ATGGCGGGCG TGAATGTGGC CACCGTCGTG TCTCAATTTC CGAAGGGTGT CGAGGATGTG AGAGTGGGCG GGGTGGCGCC TTTCGCCTTC GCCCCGTCTC GCGTTTGTTC GAGTTCATCT CTCTCTAGGG CGTCGTTCGC CTTGAGAGGG AAGGAATTCG CGTCCATTTT TAGGACGGAT CAGAGCGCCT GGAGCAGGAG GAAATCGGTG CAGGGAGGTG TTCTCGTTCG TGCCTCCTCG GGCGAGAGGA AGCGGCCCAA GTACATCCCC AATAAGATCG ATGACCCCAA TTATGTTCGA ATTTTCGACA CCACTTTGAG AGACGGCGAA CAGTCTCCCG GAGCCAGTCT GACCAGTAAA GAGAAGCTGG ACATTGCACG TCAGCTCGCC AAATTGGGGG TGGACATCAT CGAAGCTGGT TATCCCAGGT CGTCACCGGA CGATCTGGAA GCTGTCAAAA TGATCGCCAA GGAAGTAGGG AATCATGTGG ATGACGATGG ATATGTTCCT GTTATTTGTG GTTTATCCCG GTGCAACAAG GCAGACATTG ACGCAGCTTG GGAAGGAGTG AAGCACGCTC TGCGACCCAG GATTCATACC TTTATCGCCA CCAGTGAAAT TCACATGCAG CACAAGCTCC GCAAGACCCC AGAAGAGGTA ATCCAAATTG CGTCGGAGAT GGTAGCGTAT GCTCGGAGCT TGGGCTGCGA CGACGTGGAG TTCAGTCCGG AAGATGCTGG GAGGTCTGAT CCAGAGTTTC TCTACCGAAT TTTGTCCGAA GTAATTAAAG CTGGAGCCAC CACTCTTAAT ATTCCAGACA CTGTTGGCTA TACATTACCC GTCGAATTCG GGGGACTGAT TGCTAAAATC AAAGCCAACA CTCCTGGAGC TGAGAATGTG ATAATCTCCA CGCATTGCCA AAATGATTTG GGTCTGGCCA CAGCCAACAC ACTCTCAGGT GCATACAATG GTGCTAGACA AGTGGAGGTT ACCATTAATG GAATCGGTGA GCGTGCTGGT AATGCTTCGC TTGAAGAGGT CGTTATGGCA ATCAAGTGCC GAGGAGATCA GCTTCTCGGA GGCCTTCACA CCGGGATCGT CACAAAGCAT ATCTCAGTGG CGAGTCGAAT GGTTTCCGAT CTTACAGGAA TGGTTGTTCA ACCCCATAAG GCGATTGTGG GAGCGAATGC TTTTGCTCAT GAAAGTGGTA TCCATCAGGA TGGTATGCTC AAGTTCAAAG GCACCTACGA AATCATGTCT CCGGATGAAA TTGGACTCGT CCGGTCAGAC GACGCTGGTT TAGTGCTTGG CAAGTTGAGT GGAAGGCATG CATTGAAGAC GCGTTTACAG CAGCTGGGAT ATGAGCTTGA AGGTAAAAAG CTGGATGATG TCTTCAAGCG CTTCAAAGCC GTCGCAGAGA AGAAGAAGAC TGTGGCCGAT GAAGATTTAG AAGCTCTTCT TTCTGATGAG GTCCATCAAC CTGCTACGAT CTGGTCGTTA CTTGATTTGC AGGTTGTTTG TGGTACAATG GGACTTTCAA CGGCCACTGT AAAGCTAGTG GGACCTGATG GTGCCCAGAT GATTGGGTCG TGCATTGGTA CAGGTCCTGT GGATGCAGCC TACAAAGCTG TCGATCAGAT AGTGAAGGAA CCAGTCACTC TTTTGGAGTA TTCCATGAAC TCTGTCACAG AAGGTATTGA TGCAATTGCA CATACAAGAG TTGTGCTGAG GGCCGAAAAT TCCTACTCAG TTAAGCATCC CCAGTCAGGA CAGTCGGTAC AACGATCTTT CAGTGGTTCT GGTGCAGGAG AGGATGTTGT TGTTTCAAGC GTAAGAGCGT ATGTTAGTGC TTTGAACAAG ATTCTAGGTT TCCAAATTAG CCGTCCATCT GTGACATCTG CCAGGTCTGA AGAACCTCGA GTTGCCGCTT AA |
Protein |
| >Mp1g25400.1 MAGVNVATVV SQFPKGVEDV RVGGVAPFAF APSRVCSSSS LSRASFALRG KEFASIFRTD QSAWSRRKSV QGGVLVRASS GERKRPKYIP NKIDDPNYVR IFDTTLRDGE QSPGASLTSK EKLDIARQLA KLGVDIIEAG YPRSSPDDLE AVKMIAKEVG NHVDDDGYVP VICGLSRCNK ADIDAAWEGV KHALRPRIHT FIATSEIHMQ HKLRKTPEEV IQIASEMVAY ARSLGCDDVE FSPEDAGRSD PEFLYRILSE VIKAGATTLN IPDTVGYTLP VEFGGLIAKI KANTPGAENV IISTHCQNDL GLATANTLSG AYNGARQVEV TINGIGERAG NASLEEVVMA IKCRGDQLLG GLHTGIVTKH ISVASRMVSD LTGMVVQPHK AIVGANAFAH ESGIHQDGML KFKGTYEIMS PDEIGLVRSD DAGLVLGKLS GRHALKTRLQ QLGYELEGKK LDDVFKRFKA VAEKKKTVAD EDLEALLSDE VHQPATIWSL LDLQVVCGTM GLSTATVKLV GPDGAQMIGS CIGTGPVDAA YKAVDQIVKE PVTLLEYSMN SVTEGIDAIA HTRVVLRAEN SYSVKHPQSG QSVQRSFSGS GAGEDVVVSS VRAYVSALNK ILGFQISRPS VTSARSEEPR VAA |