Mp1g26800



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
Coils Coil Coil
ProSiteProfiles PS50868 Post-SET domain profile.
Gene3D G3DSA:3.30.40.10 Zinc/RING finger domain, C3HC4 (zinc finger)
Pfam PF16135 Tify domain binding domain
ProSiteProfiles PS50016 Zinc finger PHD-type profile.
Gene3D G3DSA:2.170.270.10 SET domain
SMART SM00317 set_7
Pfam PF13831 PHD-finger
CDD cd10518 SET_SETD1-like
SMART SM00508 PostSET_3
SUPERFAMILY SSF82199 SET domain
ProSiteProfiles PS50280 SET domain profile.
SMART SM00249 PHD_3
ProSiteProfiles PS51805 Extended PHD (ePHD) domain profile.
ProSitePatterns PS01359 Zinc finger PHD-type signature.
Pfam PF13832 PHD-zinc-finger like domain
CDD cd15571 ePHD
Pfam PF00856 SET domain
CDD cd15492 PHD_BRPF_JADE_like
SUPERFAMILY SSF57903 FYVE/PHD zinc finger
PANTHER PTHR45838 HISTONE-LYSINE-N-METHYLTRANSFERASE 2 KMT2 FAMILY MEMBER
KOG KOG1080 Histone H3 (Lys4) methyltransferase complex, subunit SET1 and related methyltransferases; N-term missing; [BK]
KOG KOG3630 Nuclear pore complex, Nup214/CAN component; N-term missing; [YU]
KOG KOG0681 Actin-related protein - Arp5p; N-term missing; C-term missing; [Z]
MapolyID Mapoly0002s0198 -

Nomenclature

Gene symbol Product Transcript ID Status
MpATX3 Chromatin related protein Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g26800.1 chr1:28051747..28066201 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.