Mp1g27170



Description

Annotation

Database ID Description
FunFam G3DSA:3.30.40.10:FF:000187 E3 ubiquitin-protein ligase ATL6
ProSiteProfiles PS50089 Zinc finger RING-type profile.
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF13639 Ring finger domain
CDD cd16461 RING-H2_EL5-like
Gene3D G3DSA:3.30.40.10 Zinc/RING finger domain, C3HC4 (zinc finger)
SUPERFAMILY SSF57850 RING/U-box
SMART SM00184 ring_2
PANTHER PTHR46539 E3 UBIQUITIN-PROTEIN LIGASE ATL42
KEGG K10664 E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:2.3.2.27]
KOG KOG4628 Predicted E3 ubiquitin ligase; N-term missing; [O]
MapolyID Mapoly0002s0161 -

Nomenclature

Gene symbol Product Transcript ID Status
MpACRE132 PAMP-responsive gene Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g27170.1 chr1:28352614..28357839 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.