Mp1g27200



Description

Annotation

Database ID Description
ProSiteProfiles PS50077 HEAT repeat profile.
ProSiteProfiles PS50082 Trp-Asp (WD) repeats profile.
MobiDBLite mobidb-lite consensus disorder prediction
ProSiteProfiles PS50011 Protein kinase domain profile.
Pfam PF00400 WD domain, G-beta repeat
Pfam PF00069 Protein kinase domain
SMART SM00220 serkin_6
FunFam G3DSA:1.25.10.10:FF:000370 phosphoinositide 3-kinase regulatory subunit 4-like
SUPERFAMILY SSF56112 Protein kinase-like (PK-like)
ProSiteProfiles PS50294 Trp-Asp (WD) repeats circular profile.
Gene3D G3DSA:2.130.10.10 -
PRINTS PR00320 G protein beta WD-40 repeat signature
CDD cd13980 STKc_Vps15
ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature.
Gene3D G3DSA:1.25.10.10 -
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1
SUPERFAMILY SSF50978 WD40 repeat-like
PANTHER PTHR17583 PHOSPHOINOSITIDE 3-KINASE REGULATORY SUBUNIT 4
SMART SM00320 WD40_4
SUPERFAMILY SSF48371 ARM repeat
KEGG K08333 phosphoinositide-3-kinase, regulatory subunit 4 [EC:2.7.11.1]
KOG KOG1240 Protein kinase containing WD40 repeats; [T]
MapolyID Mapoly0002s0158 -

Nomenclature

Gene symbol Product Transcript ID Status
MpVPS15 Autophagy protein Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g27200.1 chr1:28373573..28383771 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g27200.2 chr1:28374408..28383771 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.