| Database | ID | Description |
|---|---|---|
| ProSiteProfiles | PS51375 | Pentatricopeptide (PPR) repeat profile. |
| Pfam | PF13041 | PPR repeat family |
| PANTHER | PTHR47941 | PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 3, MITOCHONDRIAL |
| NCBIfam | TIGR00756 | pentatricopeptide repeat |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain |
| Pfam | PF01535 | PPR repeat |
| MobiDBLite | mobidb-lite | consensus disorder prediction |
| SUPERFAMILY | SSF81901 | HCP-like |
| KOG | KOG4422 | Uncharacterized conserved protein; N-term missing; C-term missing; [S] |
| KOG | KOG4422 | Uncharacterized conserved protein; N-term missing; C-term missing; [S] |
| KOG | KOG4422 | Uncharacterized conserved protein; N-term missing; C-term missing; [S] |
| MapolyID | Mapoly0002s0014 | - |
| Gene symbol | Product | Transcript ID | Status |
|---|---|---|---|
| MpPPR_5 | Pentatricopeptide repeat proteins | Published |
Caution: MBEX data are analyzed based on the v6.1 genome.
Link to the original image in MBEX
Sequences: |
Gene UTR + CDS + intron |
| >Mp1g28660.1 AATGGACGAG CGATGAGCAA GCGGCTGGAG AAATTGCGCT GCTCGCCGGG CCTCACTTCG TGCTCCGTTT CCGAATGCTG CTGGCCATGT CCCAGGCTCG CAGCTCAGCC CCGTCTCCCG TGGCAGCCGC TTGCTCTTCG CTTGGGAGGC CGCAGAGATT CTCGATAGTC CCTTGAATTC TGCTCCTTCT CCCTCATCCG AAGGCGTCGT AGCTTTTCTC GGAGGGAGAG AGCGAGATGC AGCAACTATC GGTCAGGGAT CACAGTGCAG TTTGTGCGAG CCCCTTCACA CGGTGAAACC TCATTCTTCT TCGATTCGTT TGTTTGGTGT GGCATTGGAG GAGAGTGGGA AGATGTGATG TCGCATTTGA TGCAATTCCG TGGTTGCTCA GCCGGCGGTG GCGGTTGGAG CTGTGACATT TTCATGCTGA TGATTCCGAC CTCGTGAAAT CATCAGAATT GCAGTTGTCC GTTGCGCGTT CTGCTGACGC ACCATTGCTG CGATTTGTGC AGATGGAGAG GTGGATTGAA TGTGTTCCAT GGGAGCTCCG GGAGCGGCCG TGTTCTGTTC ACCGGAAGTA ACTTCGAAAA ATCGCTCGGC ATTGGCAAGT CATGCACCTG CTTGTCTATG AGCTGGAGCG ACCCTGGCCC GACAGCTCCC GCTGTGAAAA CGAAACCCAA GAAGAAAAGC TGGAACAGGT TGGTGTGGAG TACGGAATTC TCTTCAGATT TTCTCGCCTG CAAACCAGCC AGCTCAATTG CCCTTGGACC CTAGCATGGA GTTTGCCGCT GAGTTTAATT GATGAATTTC ATTCAATTTT GTTCATTAGT TTTATTTGCG AGGAGTGGGA ATTTGTGTTT CTGAATCTGC ATCTCATACC TTGTGGGAAA ATTCGCATAT CAGGAATGTG CATCTCACAT CTATGGCCCT AGTGTCGTAA CAGCGTGGCC TGGGATGGAT GGTCCTCGTT GTCAATTCAC TTATGGTGCA GGCGAACTTG CGATATTTGT TACCAACATG ACCGACCTCA TTATTTTTCT CCCTGTAGCA CAGGAAAGTC CAGACGAGGT TATGGATGGA ACACCGAACA GGGGAAATCG AGTGTATACC AAATCATGAG CCCCGCTGCA GCCGAGCTCG TTCGTTCTCT CCAGAAACAG AAGGACGTTG ACGGATTGTG GGATGCATTG GATTCTCTAC CTTCAGGGCG GGAAAGCTGG TCGGACCTCA CCGATTGTGT CATGGAAATT CGGAACCAGC AAAATTGGCT ACTTGTCATA CAGGTAAATT TCGACCTTCT GTTTTTGGAT GCAGTAGATG TGAGAAGTAT GCCTCATCCC ATTCACGATT GTGAGAGTTT AGGCAGATTG TCTAGTCTGA CCCTCGTATG ACCCGTATCC ATGTTCTCTC GGCCTCCAGT TTGTTTTTCA ATTCATTAGG TAAATTTATT TTTCGAACCC GTAGAAGGAC CAATGCAGAT TCGACCGAAT GTTCTAACAT TTTACGTGGA CTTAATCCAA CTGTGCAGAT ACTGGAGTGG ATGCTGCAGA GCAAGCAGTT TCGTGCTGAT GTTGTTTGCT ACAATCTTCT GATCGAAGCC TATGGGAAGA TCGGTCAGTA TACTGAAGCG GAGAAGACAT TCTTTCTTTT AAGGAAGTCC TTTGTTGCCC CTACCGAGAT GAGTTACAAT ATGCTCATGG GTGCCTACTC AAAAGCCGGT TTGCTCGACA AAGCTGAGAG ACTATTTGAT CAAATGAAGG AGGACAAGTA TATTCCTGGT AATGTCTCCA CCTCTCTGAT TTCGTTGAAG CCAGCAGCTC GTTATCAAAA GCTTAAATGT TTCTAGTTGG GGACATGCAG AATTCTGATT ATTCTCGTTC TGCATTATTC TCATGTAAGG AGTGAATAGA AAAGTAAAGA TTAAAGAGTT GATGGAAAAG TATCTGACTC TCAATTTCTC TCGCGTTGTG GATGCAGACC TCTCAACATA CAACATTTTT CTCGAAGTAC TCGCAAAGGC AGGCAAATAC AAGAAGGCCG AGCGAGTATT CTCGGAGATG AAAGCGAACT GCAATCCGTC CGCAGCTACT TACACGTCGA TGATAAACAT ATACGGTAGA GTAAGTTTAT CTATTTGATT TCTTCTCATA CGTTTTTGGC GTTCTTAAGA CACTTCACAT ACACTTTTGT GTGAATTCAC AGCAAAAGTA CTTTATCCTT CAATATTCTT CACATGAAGT AGATTTGGTT TCACCAGGAA TCCAGCCATG TGTTGGCAGC CGTTTGTTGT TTGTGTGGTA AAACTCCTCG GGCTGCCCTC GTTTATAATA TTATACCTGC CGCAGGCTAG GCTCCCGGAG ATGGCAGAGA AGCTGTATTC TAGTATGAGG GACTCGGATT GTCCACCGAC TCTGTACACC ATGACTGCCC TGATCAACGC CTACGCCAAA GAAGGATTAT GCGAGAAAGC CGAGGAAGCC TTTCACAACA TCAAAGCTCT TGGTCTTGAA CCTGATGTGT ACAGCTACAA CGCTTTGATG GGAGCCTACA GGTCTGTGTT GCAGTCGTGT ACTCTTCATT CTACTACCCC GTCAATGAAT CACAGGGATT CTATGGAACT TAATCTCTAC ATTGAAATCT AGGTGATGGA GTTCTATCTT TTTCCTCATG GCCAATTCGT ATAACTATCT GTTCGAAAGC CTCCCTGCAG AGTGTTTGAC ACGTGTTCTT GGTGCAGTCA TGGAGGTTTC CCAGCGGGTG CTTCTGAAGT TTTTGACGCC ATGAAGGATG ATGGCATAGA TCCGGATCAA GTATCGTACA ACATTCTCAT AGACGCTTTC AGTCGAGCCG GTCAAAGTGA AGGTAAGGAG CCACTGCCAT GTTTTGTGTA ATTTTTGTGG GGTTTTCTCT TTATTATCTG TTGCTAGAAA GGCGTTGTCT ACCACTGGCT GGTTCTCTCA GTGGGAAACC TGAACATTTC AGCTTTTGCT GTATCTGTGC AGAGGCAGAG AGGGTTTTCA AGATTATGAA GGATCATGGC TTCCAGCCAA CTTCAAGGTC CTACATGCTG CTCCTGAAAG GGTTGTTAAG AGCAGGGCAA GTGATGAAAG CTGAGAATCT AATTAAAGGC ATGGAAGCTG ATGGTCGCAA ACCTGATACA TTCATGTACA ATTCGTTATT ACACGCGAAG GGGACCCGAG GAAATTTTGT AGAGGTTGAA CGTTTATTTA ATGTAATGAA AAGTGGTTCT AGGAGTCGGC CTGATATATC TACTTATAAC ATACTCATAA ACATCAACGC CCAGGCAGGG TTTATAGATA AAGCAGAGAA TATTTTCAAT AATTTAGAAC GGGAAGGGCT TGTGCCCAAT GTCACCACTT GGACTTCTCT CATGGGCGCT TATTCCAAGA GGAAGCTGTT CAAGAAGTGC TTGAATGTGT GGGATAGAAT GATAAAAGCT CGCTGTGTAC CAGATGCAGC AACTTGGAAG GTTTTTCTTG CATCTTGCAA TACCCAGGAA GAAATGGACG AAGTCACAGC ATTGACCCAG CAATATCAGT CCGAAGGACT TAGAAAAGCT CGTAATAAAG ATCATAATTA TCAGTGAGTA CTTTGAACTG TC |
mRNA UTR + CDS |
| >Mp1g28660.1 AATGGACGAG CGATGAGCAA GCGGCTGGAG AAATTGCGCT GCTCGCCGGG CCTCACTTCG TGCTCCGTTT CCGAATGCTG CTGGCCATGT CCCAGGCTCG CAGCTCAGCC CCGTCTCCCG TGGCAGCCGC TTGCTCTTCG CTTGGGAGGC CGCAGAGATT CTCGATAGTC CCTTGAATTC TGCTCCTTCT CCCTCATCCG AAGGCGTCGT AGCTTTTCTC GGAGGGAGAG AGCGAGATGC AGCAACTATC GGTCAGGGAT CACAGTGCAG TTTGTGCGAG CCCCTTCACA CGATGGAGAG GTGGATTGAA TGTGTTCCAT GGGAGCTCCG GGAGCGGCCG TGTTCTGTTC ACCGGAAGTA ACTTCGAAAA ATCGCTCGGC ATTGGCAAGT CATGCACCTG CTTGTCTATG AGCTGGAGCG ACCCTGGCCC GACAGCTCCC GCTGTGAAAA CGAAACCCAA GAAGAAAAGC TGGAACAGCA CAGGAAAGTC CAGACGAGGT TATGGATGGA ACACCGAACA GGGGAAATCG AGTGTATACC AAATCATGAG CCCCGCTGCA GCCGAGCTCG TTCGTTCTCT CCAGAAACAG AAGGACGTTG ACGGATTGTG GGATGCATTG GATTCTCTAC CTTCAGGGCG GGAAAGCTGG TCGGACCTCA CCGATTGTGT CATGGAAATT CGGAACCAGC AAAATTGGCT ACTTGTCATA CAGATACTGG AGTGGATGCT GCAGAGCAAG CAGTTTCGTG CTGATGTTGT TTGCTACAAT CTTCTGATCG AAGCCTATGG GAAGATCGGT CAGTATACTG AAGCGGAGAA GACATTCTTT CTTTTAAGGA AGTCCTTTGT TGCCCCTACC GAGATGAGTT ACAATATGCT CATGGGTGCC TACTCAAAAG CCGGTTTGCT CGACAAAGCT GAGAGACTAT TTGATCAAAT GAAGGAGGAC AAGTATATTC CTGACCTCTC AACATACAAC ATTTTTCTCG AAGTACTCGC AAAGGCAGGC AAATACAAGA AGGCCGAGCG AGTATTCTCG GAGATGAAAG CGAACTGCAA TCCGTCCGCA GCTACTTACA CGTCGATGAT AAACATATAC GGTAGAGCTA GGCTCCCGGA GATGGCAGAG AAGCTGTATT CTAGTATGAG GGACTCGGAT TGTCCACCGA CTCTGTACAC CATGACTGCC CTGATCAACG CCTACGCCAA AGAAGGATTA TGCGAGAAAG CCGAGGAAGC CTTTCACAAC ATCAAAGCTC TTGGTCTTGA ACCTGATGTG TACAGCTACA ACGCTTTGAT GGGAGCCTAC AGTCATGGAG GTTTCCCAGC GGGTGCTTCT GAAGTTTTTG ACGCCATGAA GGATGATGGC ATAGATCCGG ATCAAGTATC GTACAACATT CTCATAGACG CTTTCAGTCG AGCCGGTCAA AGTGAAGAGG CAGAGAGGGT TTTCAAGATT ATGAAGGATC ATGGCTTCCA GCCAACTTCA AGGTCCTACA TGCTGCTCCT GAAAGGGTTG TTAAGAGCAG GGCAAGTGAT GAAAGCTGAG AATCTAATTA AAGGCATGGA AGCTGATGGT CGCAAACCTG ATACATTCAT GTACAATTCG TTATTACACG CGAAGGGGAC CCGAGGAAAT TTTGTAGAGG TTGAACGTTT ATTTAATGTA ATGAAAAGTG GTTCTAGGAG TCGGCCTGAT ATATCTACTT ATAACATACT CATAAACATC AACGCCCAGG CAGGGTTTAT AGATAAAGCA GAGAATATTT TCAATAATTT AGAACGGGAA GGGCTTGTGC CCAATGTCAC CACTTGGACT TCTCTCATGG GCGCTTATTC CAAGAGGAAG CTGTTCAAGA AGTGCTTGAA TGTGTGGGAT AGAATGATAA AAGCTCGCTG TGTACCAGAT GCAGCAACTT GGAAGGTTTT TCTTGCATCT TGCAATACCC AGGAAGAAAT GGACGAAGTC ACAGCATTGA CCCAGCAATA TCAGTCCGAA GGACTTAGAA AAGCTCGTAA TAAAGATCAT AATTATCAGT GAGTACTTTG AACTGTC |
CDS |
| >Mp1g28660.1 ATGCAGCAAC TATCGGTCAG GGATCACAGT GCAGTTTGTG CGAGCCCCTT CACACGATGG AGAGGTGGAT TGAATGTGTT CCATGGGAGC TCCGGGAGCG GCCGTGTTCT GTTCACCGGA AGTAACTTCG AAAAATCGCT CGGCATTGGC AAGTCATGCA CCTGCTTGTC TATGAGCTGG AGCGACCCTG GCCCGACAGC TCCCGCTGTG AAAACGAAAC CCAAGAAGAA AAGCTGGAAC AGCACAGGAA AGTCCAGACG AGGTTATGGA TGGAACACCG AACAGGGGAA ATCGAGTGTA TACCAAATCA TGAGCCCCGC TGCAGCCGAG CTCGTTCGTT CTCTCCAGAA ACAGAAGGAC GTTGACGGAT TGTGGGATGC ATTGGATTCT CTACCTTCAG GGCGGGAAAG CTGGTCGGAC CTCACCGATT GTGTCATGGA AATTCGGAAC CAGCAAAATT GGCTACTTGT CATACAGATA CTGGAGTGGA TGCTGCAGAG CAAGCAGTTT CGTGCTGATG TTGTTTGCTA CAATCTTCTG ATCGAAGCCT ATGGGAAGAT CGGTCAGTAT ACTGAAGCGG AGAAGACATT CTTTCTTTTA AGGAAGTCCT TTGTTGCCCC TACCGAGATG AGTTACAATA TGCTCATGGG TGCCTACTCA AAAGCCGGTT TGCTCGACAA AGCTGAGAGA CTATTTGATC AAATGAAGGA GGACAAGTAT ATTCCTGACC TCTCAACATA CAACATTTTT CTCGAAGTAC TCGCAAAGGC AGGCAAATAC AAGAAGGCCG AGCGAGTATT CTCGGAGATG AAAGCGAACT GCAATCCGTC CGCAGCTACT TACACGTCGA TGATAAACAT ATACGGTAGA GCTAGGCTCC CGGAGATGGC AGAGAAGCTG TATTCTAGTA TGAGGGACTC GGATTGTCCA CCGACTCTGT ACACCATGAC TGCCCTGATC AACGCCTACG CCAAAGAAGG ATTATGCGAG AAAGCCGAGG AAGCCTTTCA CAACATCAAA GCTCTTGGTC TTGAACCTGA TGTGTACAGC TACAACGCTT TGATGGGAGC CTACAGTCAT GGAGGTTTCC CAGCGGGTGC TTCTGAAGTT TTTGACGCCA TGAAGGATGA TGGCATAGAT CCGGATCAAG TATCGTACAA CATTCTCATA GACGCTTTCA GTCGAGCCGG TCAAAGTGAA GAGGCAGAGA GGGTTTTCAA GATTATGAAG GATCATGGCT TCCAGCCAAC TTCAAGGTCC TACATGCTGC TCCTGAAAGG GTTGTTAAGA GCAGGGCAAG TGATGAAAGC TGAGAATCTA ATTAAAGGCA TGGAAGCTGA TGGTCGCAAA CCTGATACAT TCATGTACAA TTCGTTATTA CACGCGAAGG GGACCCGAGG AAATTTTGTA GAGGTTGAAC GTTTATTTAA TGTAATGAAA AGTGGTTCTA GGAGTCGGCC TGATATATCT ACTTATAACA TACTCATAAA CATCAACGCC CAGGCAGGGT TTATAGATAA AGCAGAGAAT ATTTTCAATA ATTTAGAACG GGAAGGGCTT GTGCCCAATG TCACCACTTG GACTTCTCTC ATGGGCGCTT ATTCCAAGAG GAAGCTGTTC AAGAAGTGCT TGAATGTGTG GGATAGAATG ATAAAAGCTC GCTGTGTACC AGATGCAGCA ACTTGGAAGG TTTTTCTTGC ATCTTGCAAT ACCCAGGAAG AAATGGACGA AGTCACAGCA TTGACCCAGC AATATCAGTC CGAAGGACTT AGAAAAGCTC GTAATAAAGA TCATAATTAT CAGTGA |
Protein |
| >Mp1g28660.1 MQQLSVRDHS AVCASPFTRW RGGLNVFHGS SGSGRVLFTG SNFEKSLGIG KSCTCLSMSW SDPGPTAPAV KTKPKKKSWN STGKSRRGYG WNTEQGKSSV YQIMSPAAAE LVRSLQKQKD VDGLWDALDS LPSGRESWSD LTDCVMEIRN QQNWLLVIQI LEWMLQSKQF RADVVCYNLL IEAYGKIGQY TEAEKTFFLL RKSFVAPTEM SYNMLMGAYS KAGLLDKAER LFDQMKEDKY IPDLSTYNIF LEVLAKAGKY KKAERVFSEM KANCNPSAAT YTSMINIYGR ARLPEMAEKL YSSMRDSDCP PTLYTMTALI NAYAKEGLCE KAEEAFHNIK ALGLEPDVYS YNALMGAYSH GGFPAGASEV FDAMKDDGID PDQVSYNILI DAFSRAGQSE EAERVFKIMK DHGFQPTSRS YMLLLKGLLR AGQVMKAENL IKGMEADGRK PDTFMYNSLL HAKGTRGNFV EVERLFNVMK SGSRSRPDIS TYNILININA QAGFIDKAEN IFNNLEREGL VPNVTTWTSL MGAYSKRKLF KKCLNVWDRM IKARCVPDAA TWKVFLASCN TQEEMDEVTA LTQQYQSEGL RKARNKDHNY Q |