Mp1g29760



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases
ProSiteProfiles PS51194 Superfamilies 1 and 2 helicase C-terminal domain profile.
CDD cd18793 SF2_C_SNF
Gene3D G3DSA:3.40.50.10810 -
Coils Coil Coil
PANTHER PTHR45629 SNF2/RAD54 FAMILY MEMBER
ProSiteProfiles PS51192 Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile.
Pfam PF00271 Helicase conserved C-terminal domain
Gene3D G3DSA:3.40.50.300 -
Pfam PF00176 SNF2-related domain
SMART SM00490 helicmild6
FunFam G3DSA:3.40.50.10810:FF:000055 Protein CHROMATIN REMODELING 24
SMART SM00487 ultradead3
KEGG K20093 DNA excision repair protein ERCC-6-like [EC:5.6.2.-]
KOG KOG0387 Transcription-coupled repair protein CSB/RAD26 (contains SNF2 family DNA-dependent ATPase domain); [KL]
MapolyID Mapoly0209s0008 -

Nomenclature

Gene symbol Product Transcript ID Status
Mpsnf1.9 Chromatin related protein Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp1g29760.1 chr1:31710979..31719848 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g29760.2 chr1:31710698..31719724 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g29760.3 chr1:31710698..31719724 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp1g29760.4 chr1:31710979..31719848 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.