Mp2g00710



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
ProSiteProfiles PS50082 Trp-Asp (WD) repeats profile.
ProSitePatterns PS00678 Trp-Asp (WD) repeats signature.
FunFam G3DSA:2.130.10.10:FF:000440 Bromodomain and WD repeat-containing protein
ProSiteProfiles PS50294 Trp-Asp (WD) repeats circular profile.
CDD cd00200 WD40
Coils Coil Coil
SUPERFAMILY SSF47370 Bromodomain
Gene3D G3DSA:2.130.10.10 -
PANTHER PTHR16266 WD REPEAT DOMAIN 9
Pfam PF00439 Bromodomain
SMART SM00320 WD40_4
Pfam PF00400 WD domain, G-beta repeat
SMART SM00297 bromo_6
ProSiteProfiles PS50014 Bromodomain profile.
Gene3D G3DSA:1.20.920.10 -
SUPERFAMILY SSF50978 WD40 repeat-like
KOG KOG0644 Uncharacterized conserved protein, contains WD40 repeat and BROMO domains; C-term missing; [R]
KOG KOG0644 Uncharacterized conserved protein, contains WD40 repeat and BROMO domains; N-term missing; [R]
MapolyID Mapoly0028s0080 -

Nomenclature

Gene symbol Product Transcript ID Status
MpBromo4 Chromatin related protein Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp2g00710.1 chr2:850553..868891 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp2g00710.2 chr2:850553..868891 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp2g00710.3 chr2:850553..862167 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.