Mp2g05060



Description

Annotation

Database ID Description
ProSiteProfiles PS50103 Zinc finger C3H1-type profile.
SMART SM00322 kh_6
SUPERFAMILY SSF90229 CCCH zinc finger
MobiDBLite mobidb-lite consensus disorder prediction
Gene3D G3DSA:4.10.1000.10 -
Pfam PF00642 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
Pfam PF00013 KH domain
ProSiteProfiles PS50084 Type-1 KH domain profile.
PANTHER PTHR12547 CCCH ZINC FINGER/TIS11-RELATED
SUPERFAMILY SSF54791 Eukaryotic type KH-domain (KH-domain type I)
SMART SM00356 c3hfinal6
Gene3D G3DSA:3.30.1370.10 K Homology domain, type 1
CDD cd22464 KH-I_AtC3H36_like
FunFam G3DSA:4.10.1000.10:FF:000003 Zinc finger CCCH domain-containing protein
Pfam PF14608 RNA-binding, Nab2-type zinc finger
KOG KOG1677 CCCH-type Zn-finger protein; N-term missing; C-term missing; [R]
KOG KOG1677 CCCH-type Zn-finger protein; N-term missing; C-term missing; [R]
KOG KOG2191 RNA-binding protein NOVA1/PASILLA and related KH domain proteins; N-term missing; C-term missing; [AR]
KOG KOG1677 CCCH-type Zn-finger protein; N-term missing; C-term missing; [R]
MapolyID Mapoly0031s0160 -

Nomenclature

Gene symbol Product Transcript ID Status
MpC3H8 transcription factor, C3H Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp2g05060.1 chr2:5763142..5769482 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.