Mp2g09130



Description

Annotation

Database ID Description
Pfam PF02780 Transketolase, C-terminal domain
Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs].
FunFam G3DSA:3.40.50.920:FF:000002 1-deoxy-D-xylulose-5-phosphate synthase
NCBIfam TIGR00204 1-deoxy-D-xylulose-5-phosphate synthase
CDD cd02007 TPP_DXS
ProSitePatterns PS00802 Transketolase signature 2.
Pfam PF02779 Transketolase, pyrimidine binding domain
Gene3D G3DSA:3.40.50.970 -
Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase
SUPERFAMILY SSF52518 Thiamin diphosphate-binding fold (THDP-binding)
FunFam G3DSA:3.40.50.970:FF:000005 1-deoxy-D-xylulose-5-phosphate synthase
SUPERFAMILY SSF52922 TK C-terminal domain-like
PANTHER PTHR43322 1-D-DEOXYXYLULOSE 5-PHOSPHATE SYNTHASE-RELATED
CDD cd07033 TPP_PYR_DXS_TK_like
ProSitePatterns PS00801 Transketolase signature 1.
Gene3D G3DSA:3.40.50.920 -
SMART SM00861 Transket_pyr_3
Coils Coil Coil
KEGG K01662 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
KOG KOG0523 Transketolase; [G]
MapolyID Mapoly0015s0196 -

Nomenclature

Gene symbol Product Transcript ID Status
MpDXS1 Secondary metabolism enzyme, Terpene biosynthesis enzymes Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp2g09130.1 chr2:10039026..10044138 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.