Mp2g13020



Description

Annotation

Database ID Description
Gene3D G3DSA:1.10.10.60 -
NCBIfam TIGR01557 myb-like DNA-binding domain, SHAQKYF class
PANTHER PTHR44042 DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED
SUPERFAMILY SSF46689 Homeodomain-like
CDD cd00167 SANT
ProSiteProfiles PS51293 SANT domain profile.
FunFam G3DSA:1.10.10.60:FF:000154 Transcription factor SRM1
MobiDBLite mobidb-lite consensus disorder prediction
ProSiteProfiles PS50090 Myb-like domain profile.
FunFam G3DSA:1.10.10.60:FF:000009 transcription factor MYB1R1
SMART SM00717 sant
ProSiteProfiles PS51294 Myb-type HTH DNA-binding domain profile.
Pfam PF00249 Myb-like DNA-binding domain
KOG KOG0724 Zuotin and related molecular chaperones (DnaJ superfamily), contains DNA-binding domains; C-term missing; [O]
KOG KOG3598 Thyroid hormone receptor-associated protein complex, subunit TRAP230; N-term missing; [K]
MapolyID Mapoly0026s0070 -

Nomenclature

Gene symbol Product Transcript ID Status
MpRR-MYB2 transcription factor, MYB Published

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp2g13020.1 chr2:13989659..13993809 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp2g13020.2 chr2:13989155..13993809 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.