Mp2g16180



Description

Annotation

Database ID Description
ProSiteProfiles PS50893 ATP-binding cassette, ABC transporter-type domain profile.
Coils Coil Coil
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF00005 ABC transporter
ProSitePatterns PS00211 ABC transporters family signature.
Gene3D G3DSA:3.40.50.300 -
CDD cd03221 ABCF_EF-3
FunFam G3DSA:3.40.50.300:FF:000792 ABC transporter F family member 4
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases
SMART SM00382 AAA_5
FunFam G3DSA:3.40.50.300:FF:001124 ABC transporter F family member 4
PANTHER PTHR19211 ATP-BINDING TRANSPORT PROTEIN-RELATED
KEGG K06184 ATP-binding cassette, subfamily F, member 1
KEGG K06185 ATP-binding cassette, subfamily F, member 2
KEGG K06158 ATP-binding cassette, subfamily F, member 3
KOG KOG0066 eIF2-interacting protein ABC50 (ABC superfamily); N-term missing; [J]
MapolyID Mapoly0122s0045 -

Nomenclature

Gene symbol Product Transcript ID Status
MpABCF1 ABC transporters Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp2g16180.1 chr2:18486262..18490131 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.