Mp2g19480



Description

Annotation

Database ID Description
Gene3D G3DSA:3.40.47.10 -
SUPERFAMILY SSF53901 Thiolase-like
CDD cd00831 CHS_like
Pfam PF02797 Chalcone and stilbene synthases, C-terminal domain
PIRSF PIRSF000451 PKS_III
PANTHER PTHR11877 HYDROXYMETHYLGLUTARYL-COA SYNTHASE
FunFam G3DSA:3.40.47.10:FF:000025 Chalcone synthase 2
FunFam G3DSA:3.40.47.10:FF:000014 Chalcone synthase 1
Pfam PF00195 Chalcone and stilbene synthases, N-terminal domain
KEGG K00660 chalcone synthase [EC:2.3.1.74]
MapolyID Mapoly0055s0104 -

Nomenclature

Gene symbol Product Transcript ID Status
MpPKS/CHS3 Secondary metabolism enzyme Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp2g19480.1 chr2:23634284..23640998 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp2g19480.2 chr2:23634173..23640998 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp2g19480.3 chr2:23634284..23640998 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp2g19480.4 chr2:23634831..23640998 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp2g19480.5 chr2:23635290..23640998 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.