Mp2g26680



Description

Annotation

Database ID Description
ProSiteProfiles PS50013 Chromo and chromo shadow domain profile.
Gene3D G3DSA:3.40.50.300 -
MobiDBLite mobidb-lite consensus disorder prediction
CDD cd20404 Tudor_Agenet_AtEML-like
Pfam PF00271 Helicase conserved C-terminal domain
SUPERFAMILY SSF54160 Chromo domain-like
Gene3D G3DSA:2.40.50.40 -
SMART SM00384 AT_hook_2
Pfam PF00176 SNF2-related domain
Pfam PF21743 PTM/DIR17-like, Tudor domain
SMART SM00298 chromo_7
Pfam PF00385 Chromo (CHRromatin Organisation MOdifier) domain
SMART SM00490 helicmild6
SMART SM00487 ultradead3
SMART SM00249 PHD_3
PANTHER PTHR45623 CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED
SUPERFAMILY SSF57903 FYVE/PHD zinc finger
CDD cd18793 SF2_C_SNF
Gene3D G3DSA:3.40.50.10810 -
ProSiteProfiles PS51192 Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile.
SUPERFAMILY SSF63748 Tudor/PWWP/MBT
ProSiteProfiles PS50016 Zinc finger PHD-type profile.
SMART SM00333 TUDOR_7
ProSiteProfiles PS51194 Superfamilies 1 and 2 helicase C-terminal domain profile.
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases
Gene3D G3DSA:2.30.30.140 -
Gene3D G3DSA:2.30.30.1150 -
PRINTS PR00929 AT-hook-like domain signature
KOG KOG0385 Chromatin remodeling complex WSTF-ISWI, small subunit; C-term missing; [K]
KOG KOG1244 Predicted transcription factor Requiem/NEURO-D4; N-term missing; [K]
KOG KOG4462 WASP-interacting protein VRP1/WIP, contains WH2 domain; [Z]
KOG KOG2748 Uncharacterized conserved protein, contains chromo domain; C-term missing; [B]
MapolyID Mapoly0025s0016 -

Nomenclature

Gene symbol Product Transcript ID Status
Mpsnf1.12 Chromatin related protein Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp2g26680.1 chr2:32821862..32838206 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.