Mp3g00700



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
Coils Coil Coil
SUPERFAMILY SSF57997 Tropomyosin
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases
PANTHER PTHR45916 STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5
FunFam G3DSA:3.40.50.300:FF:001301 Structural maintenance of chromosomes 5
Gene3D G3DSA:3.40.50.300 -
Pfam PF02463 RecF/RecN/SMC N terminal domain
KEGG K22803 structural maintenance of chromosomes protein 5
KOG KOG0979 Structural maintenance of chromosome protein SMC5/Spr18, SMC superfamily; [BDL]
KOG KOG0018 Structural maintenance of chromosome protein 1 (sister chromatid cohesion complex Cohesin, subunit SMC1); N-term missing; C-term missing; [D]
MapolyID Mapoly0007s0066 -

Nomenclature

Gene symbol Product Transcript ID Status
MpSMC5 Chromatin related protein Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp3g00700.1 chr3:924098..933609 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp3g00700.2 chr3:922220..933609 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.