Mp3g02320



Description

Annotation

Database ID Description
CDD cd00086 homeodomain
MobiDBLite mobidb-lite consensus disorder prediction
Coils Coil Coil
Gene3D G3DSA:1.10.10.60 -
Pfam PF02183 Homeobox associated leucine zipper
SMART SM00389 HOX_1
FunFam G3DSA:1.10.10.60:FF:000159 Homeobox-leucine zipper protein HAT5
ProSiteProfiles PS50071 'Homeobox' domain profile.
ProSitePatterns PS00027 'Homeobox' domain signature.
PRINTS PR00031 Lambda-repressor HTH signature
Pfam PF00046 Homeodomain
PANTHER PTHR24326 HOMEOBOX-LEUCINE ZIPPER PROTEIN
SUPERFAMILY SSF46689 Homeodomain-like
KEGG K09338 homeobox-leucine zipper protein
KOG KOG0483 Transcription factor HEX, contains HOX and HALZ domains; N-term missing; C-term missing; [K]
MapolyID Mapoly0007s0221 -

Nomenclature

Gene symbol Product Transcript ID Status
MpC1HDZ transcription factor, HD, homeodomain protein Published
MpHD3 transcription factor, HD, homeodomain protein Published

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp3g02320.1 chr3:2365560..2370273 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.