Mp3g03970



Description

Annotation

Database ID Description
PRINTS PR01226 Expansin signature
SMART SM00837 dpbb_1
SUPERFAMILY SSF49590 PHL pollen allergen
Pfam PF01357 Expansin C-terminal domain
SUPERFAMILY SSF50685 Barwin-like endoglucanases
CDD cd22274 DPBB_EXPA_N
PRINTS PR01225 Expansin/Lol pI family signature
ProSiteProfiles PS50842 Expansin, family-45 endoglucanase-like domain profile.
Gene3D G3DSA:2.40.40.10 -
ProSiteProfiles PS50843 Expansin, Cellulose-binding-like domain profile.
Gene3D G3DSA:2.60.40.760 -
PANTHER PTHR31867 EXPANSIN-A15
Pfam PF03330 Lytic transglycolase
KEGG K20628 expansin
MapolyID Mapoly0022s0134 -

Nomenclature

Gene symbol Product Transcript ID Status
MpExpansin16 Cell wall related protein Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp3g03970.1 chr3:4344631..4346512 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp3g03970.2 chr3:4344171..4346499 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.