Mp3g05610



Description

Annotation

Database ID Description
Pfam PF10497 Zinc-finger domain of monoamine-oxidase A repressor R1
ProSiteProfiles PS50089 Zinc finger RING-type profile.
ProSiteProfiles PS51667 WRC domain profile.
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF02373 JmjC domain, hydroxylase
SUPERFAMILY SSF51197 Clavaminate synthase-like
ProSiteProfiles PS51184 JmjC domain profile.
SMART SM00558 cupin_9
Gene3D G3DSA:2.60.120.650 Cupin
Pfam PF08879 WRC
PANTHER PTHR12549 JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN
Coils Coil Coil
KEGG K15601 [histone H3]-dimethyl-L-lysine9 demethylase [EC:1.14.11.65]
KOG KOG1356 Putative transcription factor 5qNCA, contains JmjC domain; N-term missing; [K]
MapolyID Mapoly0006s0033 -

Nomenclature

Gene symbol Product Transcript ID Status
MpHDM4 Chromatin related protein Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp3g05610.1 chr3:6040450..6051984 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp3g05610.2 chr3:6040450..6051984 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.