Mp3g05720



Description

Annotation

Database ID Description
Pfam PF05000 RNA polymerase Rpb1, domain 4
Pfam PF04983 RNA polymerase Rpb1, domain 3
Gene3D G3DSA:4.10.860.120 RNA polymerase II, clamp domain
Gene3D G3DSA:2.40.40.20 -
Gene3D G3DSA:6.10.250.2940 -
SUPERFAMILY SSF64484 beta and beta-prime subunits of DNA dependent RNA-polymerase
SMART SM00663 rpolaneu7
MobiDBLite mobidb-lite consensus disorder prediction
Gene3D G3DSA:6.20.50.80 -
PANTHER PTHR19376 DNA-DIRECTED RNA POLYMERASE
Pfam PF00623 RNA polymerase Rpb1, domain 2
Pfam PF04997 RNA polymerase Rpb1, domain 1
Gene3D G3DSA:1.10.132.30 -
Gene3D G3DSA:1.10.274.100 RNA polymerase Rpb1, domain 3
Gene3D G3DSA:3.10.450.40 -
Pfam PF11523 Protein of unknown function (DUF3223)
Gene3D G3DSA:3.30.1490.180 RNA polymerase ii
Pfam PF04998 RNA polymerase Rpb1, domain 5
KOG KOG0260 RNA polymerase II, large subunit; C-term missing; [K]
MapolyID Mapoly0006s0043 -

Nomenclature

Gene symbol Product Transcript ID Status
MpNRPD1 Chromatin related protein Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp3g05720.1 chr3:6125480..6138837 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.