Mp3g12060



Description

Annotation

Database ID Description
Coils Coil Coil
Gene3D G3DSA:1.10.10.10 -
MobiDBLite mobidb-lite consensus disorder prediction
SMART SM01372 E2F_TDP_2
Pfam PF08781 Transcription factor DP
SUPERFAMILY SSF46785 "Winged helix" DNA-binding domain
SMART SM01138 DP_2
CDD cd14458 DP_DD
PANTHER PTHR12548 TRANSCRIPTION FACTOR DP
FunFam G3DSA:1.20.140.80:FF:000002 Transcription factor-like protein DPB
Pfam PF02319 E2F/DP family winged-helix DNA-binding domain
Gene3D G3DSA:1.20.140.80 Transcription factor DP
FunFam G3DSA:1.10.10.10:FF:000187 Transcription factor-like protein DPB
SUPERFAMILY SSF144074 E2F-DP heterodimerization region
KEGG K04683 transcription factor Dp-1
KOG KOG2829 E2F-like protein; C-term missing; [K]
MapolyID Mapoly0050s0010 -

Nomenclature

Gene symbol Product Transcript ID Status
MpDP1 transcription factor, E2F/DP/DEL Published

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp3g12060.1 chr3:12621475..12629382 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp3g12060.2 chr3:12621991..12629696 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp3g12060.3 chr3:12621732..12629382 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp3g12060.4 chr3:12621820..12629382 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.