Mp3g14160



Description

Annotation

Database ID Description
Gene3D G3DSA:1.10.600.10 Farnesyl Diphosphate Synthase
FunFam G3DSA:1.10.600.10:FF:000022 NADH dehydrogenase complex assembly factor 6-like protein
PANTHER PTHR21181 -
SUPERFAMILY SSF48576 Terpenoid synthases
Pfam PF00494 Squalene/phytoene synthase
KEGG K18163 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 6
KOG KOG4411 Phytoene/squalene synthetase; [I]
MapolyID Mapoly0004s0255 -

Nomenclature

Gene symbol Product Transcript ID Status
MpSQS2 Secondary metabolism enzyme, Terpene biosynthesis enzymes Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp3g14160.1 chr3:14649969..14654500 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp3g14160.2 chr3:14649969..14654500 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp3g14160.3 chr3:14649969..14654500 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.