Mp3g16330



Description

Annotation

Database ID Description
MobiDBLite mobidb-lite consensus disorder prediction
SUPERFAMILY SSF82199 SET domain
Pfam PF00856 SET domain
ProSiteProfiles PS50280 SET domain profile.
PANTHER PTHR46450 INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED
SMART SM00468 preset_2
Gene3D G3DSA:1.10.8.850 -
SMART SM00317 set_7
Pfam PF05033 Pre-SET motif
ProSiteProfiles PS51580 Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile.
CDD cd10538 SET_SETDB-like
Gene3D G3DSA:2.170.270.10 SET domain
Pfam PF10440 Ubiquitin-binding WIYLD domain
KOG KOG1082 Histone H3 (Lys9) methyltransferase SUV39H1/Clr4, required for transcriptional silencing; [BK]
MapolyID Mapoly0004s0038 -

Nomenclature

Gene symbol Product Transcript ID Status
MpSUVR1 Chromatin related protein Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp3g16330.1 chr3:16805400..16812611 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp3g16330.2 chr3:16805400..16812707 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp3g16330.3 chr3:16805400..16812611 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp3g16330.4 chr3:16805400..16812611 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)
Mp3g16330.5 chr3:16805400..16812611 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.