Mp3g21620



Description

Annotation

Database ID Description
ProSiteProfiles PS51375 Pentatricopeptide (PPR) repeat profile.
Gene3D G3DSA:1.25.40.10 Tetratricopeptide repeat domain
SUPERFAMILY SSF160443 SMR domain-like
PANTHER PTHR47447 OS03G0856100 PROTEIN
Pfam PF13812 Pentatricopeptide repeat domain
Gene3D G3DSA:3.30.1370.110 -
NCBIfam TIGR00756 pentatricopeptide repeat
MobiDBLite mobidb-lite consensus disorder prediction
Pfam PF01535 PPR repeat
Pfam PF13041 PPR repeat family
SUPERFAMILY SSF81901 HCP-like
ProSiteProfiles PS50828 Smr domain profile.
SMART SM00463 SMR_2
SUPERFAMILY SSF48452 TPR-like
KOG KOG4422 Uncharacterized conserved protein; N-term missing; C-term missing; [S]
KOG KOG2003 TPR repeat-containing protein; N-term missing; [R]
MapolyID Mapoly0089s0054 -

Nomenclature

Gene symbol Product Transcript ID Status
MpPPR_71 Pentatricopeptide repeat proteins Published

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp3g21620.1 chr3:24143568..24148387 (-) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.