Mp4g01210



Description

Annotation

Database ID Description
PANTHER PTHR11384 ATP-BINDING CASSETTE, SUB-FAMILY D MEMBER
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases
Pfam PF06472 ABC transporter transmembrane region 2
CDD cd03223 ABCD_peroxisomal_ALDP
ProSitePatterns PS00211 ABC transporters family signature.
Gene3D G3DSA:3.40.50.300 -
ProSiteProfiles PS50929 ABC transporter integral membrane type-1 fused domain profile.
Gene3D G3DSA:1.20.1560.10 ABC transporter type 1, transmembrane domain
SMART SM00382 AAA_5
MobiDBLite mobidb-lite consensus disorder prediction
ProSiteProfiles PS50893 ATP-binding cassette, ABC transporter-type domain profile.
SUPERFAMILY SSF90123 ABC transporter transmembrane region
Pfam PF00005 ABC transporter
KEGG K02471 vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
KOG KOG0060 Long-chain acyl-CoA transporter, ABC superfamily (involved in peroxisome organization and biogenesis); [IR]
MapolyID Mapoly0066s0022 -

Nomenclature

Gene symbol Product Transcript ID Status
MpABC42 ABC transporter Provisional

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp4g01210.1 chr4:1375304..1380356 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.