Mp4g06900



Description

Annotation

Database ID Description
Coils Coil Coil
ProSiteProfiles PS50137 Double stranded RNA-binding domain (dsRBD) profile.
CDD cd10845 DSRM_RNAse_III_family
Gene3D G3DSA:3.40.50.1000 -
PANTHER PTHR23081 RNA POLYMERASE II CTD PHOSPHATASE
MobiDBLite mobidb-lite consensus disorder prediction
SUPERFAMILY SSF54768 dsRNA-binding domain-like
SMART SM00577 forpap2
FunFam G3DSA:3.40.50.1000:FF:000035 RNA polymerase II C-terminal domain phosphatase-like 1
ProSiteProfiles PS50969 FCP1 homology domain profile.
Gene3D G3DSA:3.30.160.20 -
Pfam PF03031 NLI interacting factor-like phosphatase
SMART SM00358 DRBM_3
Pfam PF00035 Double-stranded RNA binding motif
SUPERFAMILY SSF56784 HAD-like
KEGG K18998 RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:3.1.3.16]
KOG KOG0323 TFIIF-interacting CTD phosphatases, including NLI-interacting factor; C-term missing; [K]
KOG KOG1817 Ribonuclease; N-term missing; [A]
KOG KOG3732 Staufen and related double-stranded-RNA-binding proteins; C-term missing; [UK]
MapolyID Mapoly0125s0035 -

Nomenclature

Gene symbol Product Transcript ID Status
MpCPL1 RNA polymerase II C-terminal domain phosphatase Published

Expression Level powered by MBEX

Caution: MBEX data are analyzed based on the v6.1 genome.

Link to the original image in MBEX

Transcript models

Transcript ID Location Sequences Extract region
Mp4g06900.1 chr4:9207622..9218381 (+) Gene /  mRNA /  CDS /  Protein
FASTA / GenBank (with flanking bases)

Gene structure:

Sequences:

Gene UTR + CDS + intron

FASTA

mRNA UTR + CDS

FASTA

CDS

FASTA

Protein

FASTA


MarpolBase / Genome Informatics Lab. NIG.